Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq6876 273 3e-68
seq1021 226 3e-54
>seq6876
Length=59938
Score = 273 bits (302), Expect = 3e-68
Identities = 521/762 (68%), Gaps = 8/762 (1%)
Strand=Plus/Plus
Query 160234 AGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACA 160293
|||||||||||||||| | || ||| | || | | ||||| |||||| ||
Sbjct 27518 AGTACTGCCACTTCACCAGCCGGGCGAGGGCGTTGACGTCGGTCACGTCGTAGCGGTGGT 27577
Query 160294 TCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGT 160353
| ||| | || ||||| |||||||||| | ||| || |||||||||||| ||||
Sbjct 27578 TGCTGGGTATGGACCCGGGCGCGCCGGGCATCCTCTGCAGCGTGGCCCACAGGAACTCGT 27637
Query 160354 CGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG---TCCCGCA 160410
|||||||||| ||||| | ||| ||||| | | | ||| |||| ||| ||
Sbjct 27638 CGGGGCTGTAGCCGTCCTGCGCCCACTCCATCAGC-CGCCGCGC--CCTGGGGTCCTCCA 27694
Query 160411 GAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTA 160470
| ||| ||| | | | | | || || | ||| || | ||| | ||| |||||
Sbjct 27695 GCACGAAGCGGACGAACGCCCGGCTGACCACGATGTAGGCCCCGCCCGCGAACATCGGCG 27754
Query 160471 TGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530
| | || |||| | | ||||||| | || | | | || | | ||| |
Sbjct 27755 TCTCGACGGGAGGCGGGGCCTTGTCCTTCTCCGTCCTCCGGATGGCGCCGTCCGCCACCT 27814
Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590
||| ||||||||||||| || |||| || ||| | |||||||| || ||||
Sbjct 27815 CGTACCGCTTCTTCCACCGCGCCTCCTTGGAGGGCGGCGTCTTCTCCGTCTCCAGGCTGT 27874
Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650
| || | || | ||||||| || ||||| ||||| ||||| ||||| ||||
Sbjct 27875 TCTTCCCCTGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTTGGTCTTCAGCGGGAAGT 27934
Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710
| ||||||| ||| | | |||| |||| ||||| ||| || |||||| | ||
Sbjct 27935 CCTGGCCGCACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTGGTTGTACAGGTCGCCCA 27994
Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770
|||| || | || |||||||| ||||||||| |||||||| ||| |||| || |
Sbjct 27995 TGCAGTTGAGGTCGGCCTGCACCCGGCTCCAGCTGGCGTACACCACGCTCTCCAGGCGGC 28054
Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCT 160830
|||| | |||||||| ||||| || || |||| | ||| ||| | ||| |
Sbjct 28055 TGGCGATGAAGACGTTGTCGAAGCAGGAGGCGATCTGCTGCACGGCCGAGAGGAAGGTGG 28114
Query 160831 TATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGA 160890
|||||| ||||||||||| ||||| ||||||||||| |||||||||| |||||| |
Sbjct 28115 ACGGCGCCTTGCGGTCCACGTGGACGCAGTACAGGTTCTGGGGCGCGTAGACGGCCCTCA 28174
Query 160891 GCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACT 160950
||| ||||||||| ||| ||||| || |||| |||||| ||||| || || || |||
Sbjct 28175 GCAGCCTCTCGAAGGTCTGGATCTTGTGGTGGACCACGATGGAGTACGCGATGGGGAACC 28234
Query 160951 CGGTCTCCTCGCGACTCAG-GGACCCGGTCAGGTACTTTCGC 160991
|| ||||||||| ||||| || ||| || |||||| |||
Sbjct 28235 GGGCCTCCTCGCGGCTCAGCGGGAACGG-CACGTACTTGCGC 28275
Score = 134 bits (148), Expect = 2e-26
Identities = 224/323 (69%), Gaps = 3/323 (1%)
Strand=Plus/Plus
Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121
||||| || || ||||||| ||| ||| |||||| || || ||||| || ||
Sbjct 30109 TCCAGGCAGTGCACGGCGATGGGGTCGGTGTCGGTGTCGAACTTGTTGGCGAAGAGCTGC 30168
Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181
| ||||| || |||||| || ||| ||| ||| | ||||||| ||| || | |
Sbjct 30169 GGC---TTCTGCAGCATCCAGCCCAGGTCGCCGACGCCGTAGACGCAGATGGATCGCACG 30225
Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGC 160241
|| ||| ||||||||||||||| || || |||| | | | || || ||||||||
Sbjct 30226 TGGTGGCCCCTGCAAGGCGGGTACATGGCGCCCTTCGACTCCGCCCCCTCAAAGTACTGC 30285
Query 160242 CACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGA 160301
|||||||| | || ||| | || | | ||||| |||||| || | |||
Sbjct 30286 CACTTCACCAGCCGGGCGAGGGCGTTGACGTCGGTCACGTCGTAGCGGTGGTTGCTGGGT 30345
Query 160302 ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTG 160361
| || ||||| |||||||||| | ||| || |||||||||||| ||||||||||||
Sbjct 30346 ATGGACCCGGGCGCGCCGGGCATCCTCTGCAGCGTGGCCCACAGGAACTCGTCGGGGCTG 30405
Query 160362 TACGTGTCCTTAGACCATTCCAT 160384
|| ||||| | ||| |||||
Sbjct 30406 TAGCCGTCCTGCGCCCACTCCAT 30428
>seq1021
Length=130879
Score = 226 bits (250), Expect = 3e-54
Identities = 590/886 (67%), Gaps = 24/886 (3%)
Strand=Plus/Plus
Query 160084 CGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGT 160143
|||| || || ||| || || || ||||| || || || | ||| || |||||||
Sbjct 52797 CGTCCACTTCGGGGTCAAACTTGTTGGCGAAAAGGTGATGCTGG--CTG-AGCATCCAGT 52853
Query 160144 GCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGT 160203
| | ||| |||| ||| | ||||| |||| | | ||| ||| |||| |||||||
Sbjct 52854 GGAGGTCCCCGGTGCCGTAGACGCACACGGCTCTTCGGTGAGTCCCGGTGCAGGGCGGGT 52913
Query 160204 ACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCG 160263
| | || || ||| |||||| ||||| ||| ||||||||| | | ||| || |
Sbjct 52914 AGGGCGCACCCTTCCTCACGTCCCCTTCCAGGTAGCTCCACTTCACCAGGCGGGCGATGG 52973
Query 160264 CCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCA 160323
||| |||||| || | ||| ||| | ||||| || ||||| ||| |||||
Sbjct 52974 CCTCCATGTCCGACTGCTGGTACTTGCTGTTGGGGGGATAGGAGCCGGGGACGGAGGGCA 53033
Query 160324 TACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCA 160383
| | ||| |||||||||||||||||||||||||||||||| || ||||| ||| || |
Sbjct 53034 TTCTCTGCAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTAGGTATCCTTCTCCCACTCGA 53093
Query 160384 TGAACTCTCCGATTAACCTGTCCCGCAGA-ACGTGAGTAACGTAGGATCTGGTCACGACA 160442
||| ||| |||| | |||| | ||| | || | | ||| || ||
Sbjct 53094 TGAGGGA-CCGCACCTCCTGGCTTTCAGACAGGTGCCTCACAAACTCCCGGGTGACCACG 53152
Query 160443 AAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCG 160502
||||| ||| | || ||||| || || || || || || | || || | | |
Sbjct 53153 AAGTAGGCGTTCCCAGAGAACATAGGGGTGCTGATGGGGGGAGGATCCTTCTTCAG---- 53208
Query 160503 GTGTTAGAC---ACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTG 160559
||| | | | ||| | | | || ||| || | | |||| | | | |||||
Sbjct 53209 --GTTTGTCCTGATCACGGCGTGCGTCACGTTGTGGCGGTACATCCAGCGGCCTTTCTTG 53266
Query 160560 TGCGGTGG-CATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTT 160618
| | || | | ||| | ||| | ||||| |||| |||| ||| || |||
Sbjct 53267 TA-GTTGTTCGTCTCTTCGGACTCCATGCTGTTCCTGCCGTTGAGCTGTTTGAGA-GCTC 53324
Query 160619 G-ACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACT 160677
| |||||||| |||||| |||| || |||||||| ||||| ||| | || ||||
Sbjct 53325 GCACGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTACC 53384
Query 160678 TCCATTTCG---CGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734
|||| || || | || || |||||| |||||| || | || || ||||| |
Sbjct 53385 TCCAC--CGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCC 53441
Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794
|| |||||| ||||| | ||| |||| || | ||||||||||| ||||| | |
Sbjct 53442 GGGACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGC 53501
Query 160795 ACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCA 160854
| || ||||| ||| || || || ||| || | ||| |||||||||||||
Sbjct 53502 AGGAGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGGGACTTGCGGTCCACGTGCA 53561
Query 160855 CGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCT 160914
|||| |||| ||| || ||| |||| || |||| || | ||||||||||||||| || |
Sbjct 53562 CGCAGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATTT 53621
Query 160915 TATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960
| | |||| ||| || ||||| || || || ||||| |||||||
Sbjct 53622 TCTCGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTC 53667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576647688054840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |