Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq6876 273 3e-68 seq1021 226 3e-54 >seq6876 Length=59938 Score = 273 bits (302), Expect = 3e-68 Identities = 521/762 (68%), Gaps = 8/762 (1%) Strand=Plus/Plus Query 160234 AGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACA 160293 |||||||||||||||| | || ||| | || | | ||||| |||||| || Sbjct 27518 AGTACTGCCACTTCACCAGCCGGGCGAGGGCGTTGACGTCGGTCACGTCGTAGCGGTGGT 27577 Query 160294 TCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGT 160353 | ||| | || ||||| |||||||||| | ||| || |||||||||||| |||| Sbjct 27578 TGCTGGGTATGGACCCGGGCGCGCCGGGCATCCTCTGCAGCGTGGCCCACAGGAACTCGT 27637 Query 160354 CGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG---TCCCGCA 160410 |||||||||| ||||| | ||| ||||| | | | ||| |||| ||| || Sbjct 27638 CGGGGCTGTAGCCGTCCTGCGCCCACTCCATCAGC-CGCCGCGC--CCTGGGGTCCTCCA 27694 Query 160411 GAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTA 160470 | ||| ||| | | | | | || || | ||| || | ||| | ||| ||||| Sbjct 27695 GCACGAAGCGGACGAACGCCCGGCTGACCACGATGTAGGCCCCGCCCGCGAACATCGGCG 27754 Query 160471 TGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530 | | || |||| | | ||||||| | || | | | || | | ||| | Sbjct 27755 TCTCGACGGGAGGCGGGGCCTTGTCCTTCTCCGTCCTCCGGATGGCGCCGTCCGCCACCT 27814 Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590 ||| ||||||||||||| || |||| || ||| | |||||||| || |||| Sbjct 27815 CGTACCGCTTCTTCCACCGCGCCTCCTTGGAGGGCGGCGTCTTCTCCGTCTCCAGGCTGT 27874 Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650 | || | || | ||||||| || ||||| ||||| ||||| ||||| |||| Sbjct 27875 TCTTCCCCTGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTTGGTCTTCAGCGGGAAGT 27934 Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710 | ||||||| ||| | | |||| |||| ||||| ||| || |||||| | || Sbjct 27935 CCTGGCCGCACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTGGTTGTACAGGTCGCCCA 27994 Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770 |||| || | || |||||||| ||||||||| |||||||| ||| |||| || | Sbjct 27995 TGCAGTTGAGGTCGGCCTGCACCCGGCTCCAGCTGGCGTACACCACGCTCTCCAGGCGGC 28054 Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCT 160830 |||| | |||||||| ||||| || || |||| | ||| ||| | ||| | Sbjct 28055 TGGCGATGAAGACGTTGTCGAAGCAGGAGGCGATCTGCTGCACGGCCGAGAGGAAGGTGG 28114 Query 160831 TATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGA 160890 |||||| ||||||||||| ||||| ||||||||||| |||||||||| |||||| | Sbjct 28115 ACGGCGCCTTGCGGTCCACGTGGACGCAGTACAGGTTCTGGGGCGCGTAGACGGCCCTCA 28174 Query 160891 GCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACT 160950 ||| ||||||||| ||| ||||| || |||| |||||| ||||| || || || ||| Sbjct 28175 GCAGCCTCTCGAAGGTCTGGATCTTGTGGTGGACCACGATGGAGTACGCGATGGGGAACC 28234 Query 160951 CGGTCTCCTCGCGACTCAG-GGACCCGGTCAGGTACTTTCGC 160991 || ||||||||| ||||| || ||| || |||||| ||| Sbjct 28235 GGGCCTCCTCGCGGCTCAGCGGGAACGG-CACGTACTTGCGC 28275 Score = 134 bits (148), Expect = 2e-26 Identities = 224/323 (69%), Gaps = 3/323 (1%) Strand=Plus/Plus Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121 ||||| || || ||||||| ||| ||| |||||| || || ||||| || || Sbjct 30109 TCCAGGCAGTGCACGGCGATGGGGTCGGTGTCGGTGTCGAACTTGTTGGCGAAGAGCTGC 30168 Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181 | ||||| || |||||| || ||| ||| ||| | ||||||| ||| || | | Sbjct 30169 GGC---TTCTGCAGCATCCAGCCCAGGTCGCCGACGCCGTAGACGCAGATGGATCGCACG 30225 Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGC 160241 || ||| ||||||||||||||| || || |||| | | | || || |||||||| Sbjct 30226 TGGTGGCCCCTGCAAGGCGGGTACATGGCGCCCTTCGACTCCGCCCCCTCAAAGTACTGC 30285 Query 160242 CACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGA 160301 |||||||| | || ||| | || | | ||||| |||||| || | ||| Sbjct 30286 CACTTCACCAGCCGGGCGAGGGCGTTGACGTCGGTCACGTCGTAGCGGTGGTTGCTGGGT 30345 Query 160302 ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTG 160361 | || ||||| |||||||||| | ||| || |||||||||||| |||||||||||| Sbjct 30346 ATGGACCCGGGCGCGCCGGGCATCCTCTGCAGCGTGGCCCACAGGAACTCGTCGGGGCTG 30405 Query 160362 TACGTGTCCTTAGACCATTCCAT 160384 || ||||| | ||| ||||| Sbjct 30406 TAGCCGTCCTGCGCCCACTCCAT 30428 >seq1021 Length=130879 Score = 226 bits (250), Expect = 3e-54 Identities = 590/886 (67%), Gaps = 24/886 (3%) Strand=Plus/Plus Query 160084 CGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGT 160143 |||| || || ||| || || || ||||| || || || | ||| || ||||||| Sbjct 52797 CGTCCACTTCGGGGTCAAACTTGTTGGCGAAAAGGTGATGCTGG--CTG-AGCATCCAGT 52853 Query 160144 GCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGT 160203 | | ||| |||| ||| | ||||| |||| | | ||| ||| |||| ||||||| Sbjct 52854 GGAGGTCCCCGGTGCCGTAGACGCACACGGCTCTTCGGTGAGTCCCGGTGCAGGGCGGGT 52913 Query 160204 ACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCG 160263 | | || || ||| |||||| ||||| ||| ||||||||| | | ||| || | Sbjct 52914 AGGGCGCACCCTTCCTCACGTCCCCTTCCAGGTAGCTCCACTTCACCAGGCGGGCGATGG 52973 Query 160264 CCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCA 160323 ||| |||||| || | ||| ||| | ||||| || ||||| ||| ||||| Sbjct 52974 CCTCCATGTCCGACTGCTGGTACTTGCTGTTGGGGGGATAGGAGCCGGGGACGGAGGGCA 53033 Query 160324 TACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCA 160383 | | ||| |||||||||||||||||||||||||||||||| || ||||| ||| || | Sbjct 53034 TTCTCTGCAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTAGGTATCCTTCTCCCACTCGA 53093 Query 160384 TGAACTCTCCGATTAACCTGTCCCGCAGA-ACGTGAGTAACGTAGGATCTGGTCACGACA 160442 ||| ||| |||| | |||| | ||| | || | | ||| || || Sbjct 53094 TGAGGGA-CCGCACCTCCTGGCTTTCAGACAGGTGCCTCACAAACTCCCGGGTGACCACG 53152 Query 160443 AAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCG 160502 ||||| ||| | || ||||| || || || || || || | || || | | | Sbjct 53153 AAGTAGGCGTTCCCAGAGAACATAGGGGTGCTGATGGGGGGAGGATCCTTCTTCAG---- 53208 Query 160503 GTGTTAGAC---ACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTG 160559 ||| | | | ||| | | | || ||| || | | |||| | | | ||||| Sbjct 53209 --GTTTGTCCTGATCACGGCGTGCGTCACGTTGTGGCGGTACATCCAGCGGCCTTTCTTG 53266 Query 160560 TGCGGTGG-CATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTT 160618 | | || | | ||| | ||| | ||||| |||| |||| ||| || ||| Sbjct 53267 TA-GTTGTTCGTCTCTTCGGACTCCATGCTGTTCCTGCCGTTGAGCTGTTTGAGA-GCTC 53324 Query 160619 G-ACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACT 160677 | |||||||| |||||| |||| || |||||||| ||||| ||| | || |||| Sbjct 53325 GCACGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTACC 53384 Query 160678 TCCATTTCG---CGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734 |||| || || | || || |||||| |||||| || | || || ||||| | Sbjct 53385 TCCAC--CGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCC 53441 Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794 || |||||| ||||| | ||| |||| || | ||||||||||| ||||| | | Sbjct 53442 GGGACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGC 53501 Query 160795 ACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCA 160854 | || ||||| ||| || || || ||| || | ||| ||||||||||||| Sbjct 53502 AGGAGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGGGACTTGCGGTCCACGTGCA 53561 Query 160855 CGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCT 160914 |||| |||| ||| || ||| |||| || |||| || | ||||||||||||||| || | Sbjct 53562 CGCAGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATTT 53621 Query 160915 TATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960 | | |||| ||| || ||||| || || || ||||| ||||||| Sbjct 53622 TCTCGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTC 53667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576647688054840