Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq18090 86.0 7e-12 seq16166 86.0 7e-12 >seq18090 Length=13718 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 75891 TCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGA 75950 || |||| ||||||||||| || || || || ||||| |||||||| || || ||| | Sbjct 5100 TCGAATCGCAGACGGAGACGGGCACGCCCTACATGCTCTACAAGGACGCCTGCAACCGCA 5041 Query 75951 AGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAG 76010 |||| ||||| |||| |||| || |||||| || || || ||||| || || | | Sbjct 5040 AGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGCACCGAGATCGTGG 4981 Query 76011 AGTACACAGATAAGGATGAG 76030 ||||||| ||||| ||| Sbjct 4980 AGTACACCAGCAAGGACGAG 4961 >seq16166 Length=16622 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 75891 TCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGA 75950 || |||| ||||||||||| || || || || ||||| |||||||| || || ||| | Sbjct 148 TCGAATCGCAGACGGAGACGGGCACGCCCTACATGCTCTACAAGGACGCCTGCAACCGCA 89 Query 75951 AGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAG 76010 |||| ||||| |||| |||| || |||||| || || || ||||| || || | | Sbjct 88 AGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGCACCGAGATCGTGG 29 Query 76011 AGTACACAGATAAGGATGAG 76030 ||||||| ||||| ||| Sbjct 28 AGTACACCAGCAAGGACGAG 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595978928981920