Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq18090 107 2e-17 seq16166 107 2e-17 seq6971 105 8e-17 seq5861 105 8e-17 seq15491 102 1e-15 seq5648 98.7 1e-14 seq1375 91.5 2e-12 seq16555 89.7 6e-12 seq1537 89.7 6e-12 >seq18090 Length=13718 Score = 107 bits (118), Expect = 2e-17 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||||||||||||||||||| || | | || |||||||||||||||||| | | Sbjct 4983 ACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTG 5042 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCG 1628278 ||||| ||||||||||| |||||||||||||| ||| ||||| |||||| Sbjct 5043 CGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTGCG 5094 Score = 105 bits (116), Expect = 8e-17 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 1630175 CGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGT 1630234 |||| | |||||||| ||||| || ||||||||||| |||||||| || |||||||||| Sbjct 7301 CGGCCACCCCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGT 7360 Query 1630235 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCA 1630267 ||||||||||||| |||| |||||||| ||| Sbjct 7361 AGATGCCCTCGATGCTGTCGTCCTTCATGGCCA 7393 Score = 86.0 bits (94), Expect = 8e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| |||||||| |||| || ||||| ||||||||||| ||||| | ||||||||| Sbjct 5867 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGCTCCTCCTT 5926 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 || |||||| || || || || | |||| ||||| |||||| ||||||||||| Sbjct 5927 CCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGTA 5986 >seq16166 Length=16622 Score = 107 bits (118), Expect = 2e-17 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||||||||||||||||||| || | | || |||||||||||||||||| | | Sbjct 31 ACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTG 90 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCG 1628278 ||||| ||||||||||| |||||||||||||| ||| ||||| |||||| Sbjct 91 CGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTGCG 142 >seq6971 Length=92250 Score = 105 bits (116), Expect = 8e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 || ||||| || ||||||||||| | | ||| ||| |||||||| |||| ||| Sbjct 28556 AGACGCACTGCAGTCTGGATCTCCCTTGAAGTGATGGTGGACCGCTTGTTGTAGTGAGCC 28615 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 | |||| || ||| | ||||||| |||| |||||||||||||| |||||||||| Sbjct 28616 AAACGGGAGGACTCACCGGCGATGCGCTCGAAAATGTCGTTGACAAATGAGTTCATGATG 28675 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | ||| |||||||| ||| || ||||| ||||| | ||||||||| Sbjct 28676 CCCATGGCTTTGGAAGAGATGCCGGTGTCAGGATGCACTTGCTTCAACACCTTGTA 28731 >seq5861 Length=59157 Score = 105 bits (116), Expect = 8e-17 Identities = 145/198 (73%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 733110 CGCCACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCACCGAGGACATGCCCTGGTCG 733169 || ||||| || ||||||| | || || | || | || ||||||||||||||| || Sbjct 13021 CGGCACGGGCAGAAGGGCATCCTGAGCCGGCTGTGGCCCGCCGAGGACATGCCCT--TCA 12964 Query 733170 CCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATG 733229 ||| | | |||| |||||||||||| || |||||||||||| | |||| ||||||||| Sbjct 12963 CCGAGAG-CGGCATGACGCCCGACATCCTGTTCAACCCGCACGGCTTCCCCTCGCGCATG 12905 Query 733230 ACCATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAG-GTGGCCTGCCGCGAGGGCTACAT 733288 ||||| |||| | | ||||| | | ||||||| ||| || || | ||| | Sbjct 12904 ACCATCGGCATGCTCATCGAGAGCATGGCGGGCAAGTCGGGCGCGCTGC-ACGGCGCCTG 12846 Query 733289 CGGCGACGGCACGCCCTT 733306 | ||||| ||||||||| Sbjct 12845 CCACGACGCCACGCCCTT 12828 >seq15491 Length=33936 Score = 102 bits (112), Expect = 1e-15 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| ||||| ||| | ||||||||||||||| || ||||| | | ||| | Sbjct 31365 TGGCCAGCTCGCCTGGCAGCAGCAGGCGCACGGCGGTTTGAATCTCTCTTGAAGTGATGG 31424 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| |||| |||| |||| | ||| | || || |||| |||| Sbjct 31425 TAGAACGCTTGTTGTAGTGAGCCAAACGGGAAGACTCACCAGCAATACGTTCGAAAATGT 31484 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||||||||||||||||| | ||| | || |||||||| ||| || || | Sbjct 31485 CGTTGACAAACGAGTTCATGATCCCCATAGCTTTAGAAGAGATGCCAGTGTCAGGATGGA 31544 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | ||||| ||||| ||||| Sbjct 31545 CTTGCTTCAGCACTTTGTA 31563 >seq5648 Length=61206 Score = 98.7 bits (108), Expect = 1e-14 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | ||||||||||||||||| ||||| | | ||| | Sbjct 59607 TGGCCAGCTCTCCCGGCAGTAGTAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATGG 59548 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || |||||||| |||| |||| |||| | ||| | || || || | || | Sbjct 59547 TGGATCGCTTGTTGTAGTGAGCCAAACGGGAAGACTCACCAGCAATACGCTCAAAAATAT 59488 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||||||||||||||||| | ||| | ||| |||||||| ||| || || | Sbjct 59487 CGTTGACAAACGAGTTCATGATCCCCATGGCTTTGGAAGAGATGCCGGTGTCAGGATGGA 59428 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | ||||| | ||||||||| Sbjct 59427 CTTGCTTCAACACCTTGTA 59409 Score = 93.3 bits (102), Expect = 5e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || | | | |||||||||||||||||| ||||| | | ||| | Sbjct 51897 TGGCCAGCTCTCCTGGTAGCAGCAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATAG 51838 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| |||| |||| || | | ||| | || || || | |||| Sbjct 51837 TAGAACGCTTGTTGTAGTGAGCCAAACAGGAAGACTCACCAGCAATACGCTCAAAAATGT 51778 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| |||||||||||||||| | ||| | ||| |||||| || ||| || |||| Sbjct 51777 CGTTCACAAACGAGTTCATGATCCCCATGGCTTTGGAGGAGATACCTGTGTCAGGATGCA 51718 Query 1254526 CCTGCTTGAGCACCTT 1254541 | ||||| |||||||| Sbjct 51717 CTTGCTTCAGCACCTT 51702 >seq1375 Length=290674 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/113 (79%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 |||||||||||| |||||| ||||||||||| |||| ||||| || ||| ||||| Sbjct 244383 CGTCATCTCCTTCGACGGCTCCTACGTCAACTACCGGCACTTGGCCCTGCTGTGTGACAC 244442 Query 512110 CATGTGCTGCCGCGG--ATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCG 512160 |||| ||||||||| ||| || ||||| |||| || || ||| ||||||| Sbjct 244443 CATGACCTGCCGCGGCCATC--TGATGGCCATCACTCGACATGGCATCAACCG 244493 >seq16555 Length=15977 Score = 89.7 bits (98), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | |||||||||||||||||| ||||| | | ||| || Sbjct 2384 GCCAGCTCTCCTGGCAGCAGCAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATGGTA 2443 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| |||| |||| ||| | ||| | || || |||| |||||| Sbjct 2444 GAACGCTTGTTGTAGTGAGCCAAACGAGAAGACTCACCAGCAATTCGCTCGAAAATGTCG 2503 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || |||||||||||||||| ||| | ||| ||||| || ||| || || || Sbjct 2504 TTAACAAACGAGTTCATGATACCCATTGCCTTAGAAGAGATACCAGTGTCAGGATGAACT 2563 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 2564 TGCTTCAGCACCTTGTA 2580 >seq1537 Length=339721 Score = 89.7 bits (98), Expect = 6e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | ||| ||||| ||||||||||||||||| | || Sbjct 25594 GCTTGGCCAACTCTCCAGGCAGCAGCAGTCGCACAGCGGTCTGGATCTCGCGTGACGTGA 25535 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || || | || || || ||||||| |||| | Sbjct 25534 TGGTTGACCGCTTGTTGTAATGGGCTAAGCGAGAAGCTTCACCTGCGATGCGCTCGAAAA 25475 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | ||| ||||||||| ||| |||| Sbjct 25474 TGTCATTGACAAAAGAGTTCATGATGCCCATTGCTTTGGAGGAGATGCCAGTGTCCGGGT 25415 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || | ||| || || Sbjct 25414 GCACCTGTTTTAACACTTTATA 25393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100638938524253