Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq18090 107 2e-17
seq16166 107 2e-17
seq6971 105 8e-17
seq5861 105 8e-17
seq15491 102 1e-15
seq5648 98.7 1e-14
seq1375 91.5 2e-12
seq16555 89.7 6e-12
seq1537 89.7 6e-12
>seq18090
Length=13718
Score = 107 bits (118), Expect = 2e-17
Identities = 91/112 (81%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226
||||||||||||||||||||| || | | || |||||||||||||||||| | |
Sbjct 4983 ACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTG 5042
Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCG 1628278
||||| ||||||||||| |||||||||||||| ||| ||||| ||||||
Sbjct 5043 CGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTGCG 5094
Score = 105 bits (116), Expect = 8e-17
Identities = 79/93 (85%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 1630175 CGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGT 1630234
|||| | |||||||| ||||| || ||||||||||| |||||||| || ||||||||||
Sbjct 7301 CGGCCACCCCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGT 7360
Query 1630235 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCA 1630267
||||||||||||| |||| |||||||| |||
Sbjct 7361 AGATGCCCTCGATGCTGTCGTCCTTCATGGCCA 7393
Score = 86.0 bits (94), Expect = 8e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507
||| |||||||| |||| || ||||| ||||||||||| ||||| | |||||||||
Sbjct 5867 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGCTCCTCCTT 5926
Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567
|| |||||| || || || || | |||| ||||| |||||| |||||||||||
Sbjct 5927 CCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGTA 5986
>seq16166
Length=16622
Score = 107 bits (118), Expect = 2e-17
Identities = 91/112 (81%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226
||||||||||||||||||||| || | | || |||||||||||||||||| | |
Sbjct 31 ACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTG 90
Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCG 1628278
||||| ||||||||||| |||||||||||||| ||| ||||| ||||||
Sbjct 91 CGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTGCG 142
>seq6971
Length=92250
Score = 105 bits (116), Expect = 8e-17
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428
|| ||||| || ||||||||||| | | ||| ||| |||||||| |||| |||
Sbjct 28556 AGACGCACTGCAGTCTGGATCTCCCTTGAAGTGATGGTGGACCGCTTGTTGTAGTGAGCC 28615
Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488
| |||| || ||| | ||||||| |||| |||||||||||||| ||||||||||
Sbjct 28616 AAACGGGAGGACTCACCGGCGATGCGCTCGAAAATGTCGTTGACAAATGAGTTCATGATG 28675
Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544
||| | ||| |||||||| ||| || ||||| ||||| | |||||||||
Sbjct 28676 CCCATGGCTTTGGAAGAGATGCCGGTGTCAGGATGCACTTGCTTCAACACCTTGTA 28731
>seq5861
Length=59157
Score = 105 bits (116), Expect = 8e-17
Identities = 145/198 (73%), Gaps = 5/198 (3%)
Strand=Plus/Minus
Query 733110 CGCCACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCACCGAGGACATGCCCTGGTCG 733169
|| ||||| || ||||||| | || || | || | || ||||||||||||||| ||
Sbjct 13021 CGGCACGGGCAGAAGGGCATCCTGAGCCGGCTGTGGCCCGCCGAGGACATGCCCT--TCA 12964
Query 733170 CCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATG 733229
||| | | |||| |||||||||||| || |||||||||||| | |||| |||||||||
Sbjct 12963 CCGAGAG-CGGCATGACGCCCGACATCCTGTTCAACCCGCACGGCTTCCCCTCGCGCATG 12905
Query 733230 ACCATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAG-GTGGCCTGCCGCGAGGGCTACAT 733288
||||| |||| | | ||||| | | ||||||| ||| || || | ||| |
Sbjct 12904 ACCATCGGCATGCTCATCGAGAGCATGGCGGGCAAGTCGGGCGCGCTGC-ACGGCGCCTG 12846
Query 733289 CGGCGACGGCACGCCCTT 733306
| ||||| |||||||||
Sbjct 12845 CCACGACGCCACGCCCTT 12828
>seq15491
Length=33936
Score = 102 bits (112), Expect = 1e-15
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| ||||| ||| | ||||||||||||||| || ||||| | | ||| |
Sbjct 31365 TGGCCAGCTCGCCTGGCAGCAGCAGGCGCACGGCGGTTTGAATCTCTCTTGAAGTGATGG 31424
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| |||||||| |||| |||| |||| | ||| | || || |||| ||||
Sbjct 31425 TAGAACGCTTGTTGTAGTGAGCCAAACGGGAAGACTCACCAGCAATACGTTCGAAAATGT 31484
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||||||||||||||||| | ||| | || |||||||| ||| || || |
Sbjct 31485 CGTTGACAAACGAGTTCATGATCCCCATAGCTTTAGAAGAGATGCCAGTGTCAGGATGGA 31544
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
| ||||| ||||| |||||
Sbjct 31545 CTTGCTTCAGCACTTTGTA 31563
>seq5648
Length=61206
Score = 98.7 bits (108), Expect = 1e-14
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || || ||| | ||||||||||||||||| ||||| | | ||| |
Sbjct 59607 TGGCCAGCTCTCCCGGCAGTAGTAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATGG 59548
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| |||||||| |||| |||| |||| | ||| | || || || | || |
Sbjct 59547 TGGATCGCTTGTTGTAGTGAGCCAAACGGGAAGACTCACCAGCAATACGCTCAAAAATAT 59488
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||||||||||||||||| | ||| | ||| |||||||| ||| || || |
Sbjct 59487 CGTTGACAAACGAGTTCATGATCCCCATGGCTTTGGAAGAGATGCCGGTGTCAGGATGGA 59428
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
| ||||| | |||||||||
Sbjct 59427 CTTGCTTCAACACCTTGTA 59409
Score = 93.3 bits (102), Expect = 5e-13
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || || | | | |||||||||||||||||| ||||| | | ||| |
Sbjct 51897 TGGCCAGCTCTCCTGGTAGCAGCAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATAG 51838
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| |||||||| |||| |||| || | | ||| | || || || | ||||
Sbjct 51837 TAGAACGCTTGTTGTAGTGAGCCAAACAGGAAGACTCACCAGCAATACGCTCAAAAATGT 51778
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|||| |||||||||||||||| | ||| | ||| |||||| || ||| || ||||
Sbjct 51777 CGTTCACAAACGAGTTCATGATCCCCATGGCTTTGGAGGAGATACCTGTGTCAGGATGCA 51718
Query 1254526 CCTGCTTGAGCACCTT 1254541
| ||||| ||||||||
Sbjct 51717 CTTGCTTCAGCACCTT 51702
>seq1375
Length=290674
Score = 91.5 bits (100), Expect = 2e-12
Identities = 89/113 (79%), Gaps = 4/113 (4%)
Strand=Plus/Plus
Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109
|||||||||||| |||||| ||||||||||| |||| ||||| || ||| |||||
Sbjct 244383 CGTCATCTCCTTCGACGGCTCCTACGTCAACTACCGGCACTTGGCCCTGCTGTGTGACAC 244442
Query 512110 CATGTGCTGCCGCGG--ATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCG 512160
|||| ||||||||| ||| || ||||| |||| || || ||| |||||||
Sbjct 244443 CATGACCTGCCGCGGCCATC--TGATGGCCATCACTCGACATGGCATCAACCG 244493
>seq16555
Length=15977
Score = 89.7 bits (98), Expect = 6e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
||||| || || ||| | |||||||||||||||||| ||||| | | ||| ||
Sbjct 2384 GCCAGCTCTCCTGGCAGCAGCAGGCGCACGGCGGTCTGAATCTCCCTTGAAGTGATGGTA 2443
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
|||||||| |||| |||| ||| | ||| | || || |||| ||||||
Sbjct 2444 GAACGCTTGTTGTAGTGAGCCAAACGAGAAGACTCACCAGCAATTCGCTCGAAAATGTCG 2503
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
|| |||||||||||||||| ||| | ||| ||||| || ||| || || ||
Sbjct 2504 TTAACAAACGAGTTCATGATACCCATTGCCTTAGAAGAGATACCAGTGTCAGGATGAACT 2563
Query 1254528 TGCTTGAGCACCTTGTA 1254544
||||| |||||||||||
Sbjct 2564 TGCTTCAGCACCTTGTA 2580
>seq1537
Length=339721
Score = 89.7 bits (98), Expect = 6e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| || || ||| | ||| ||||| ||||||||||||||||| | ||
Sbjct 25594 GCTTGGCCAACTCTCCAGGCAGCAGCAGTCGCACAGCGGTCTGGATCTCGCGTGACGTGA 25535
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||||| | || || | || || || ||||||| |||| |
Sbjct 25534 TGGTTGACCGCTTGTTGTAATGGGCTAAGCGAGAAGCTTCACCTGCGATGCGCTCGAAAA 25475
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| |||||||| |||||||||| ||| | ||| ||||||||| ||| ||||
Sbjct 25474 TGTCATTGACAAAAGAGTTCATGATGCCCATTGCTTTGGAGGAGATGCCAGTGTCCGGGT 25415
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
||||||| || | ||| || ||
Sbjct 25414 GCACCTGTTTTAACACTTTATA 25393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6100638938524253
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