Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq6581 104 2e-17
seq1972 104 2e-17
seq7938 91.5 1e-13
>seq6581
Length=52724
Score = 104 bits (114), Expect = 2e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || || |||||||| || ||||||| |||||| || | ||||||||||||
Sbjct 1155 AGGTCAGTTTCTGGATTGTCACACTCAGGACACAGCACAAATTTTCTGATGAAACCATCC 1214
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| |||||| | || | ||||| || || ||||| ||| | || || || |||
Sbjct 1215 AGCATGTCCTGCAGTTTGTTCGCCTCGTGAGATCCATTGACAATGTAGCGGTCATTCTTG 1274
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484
||| | ||| || || || |||||||| || || || |||| || ||
Sbjct 1275 GCATCAAACTGGGTCTGGGCACCCAGCTCACAGCCAAAAAACTTGGTGGG 1324
>seq1972
Length=173698
Score = 104 bits (114), Expect = 2e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || || |||||||| || ||||||| |||||| || | ||||||||||||
Sbjct 2259 AGGTCAGTTTCTGGATTGTCACACTCAGGACACAGCACAAATTTTCTGATGAAACCATCC 2200
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| |||||| | || | ||||| || || ||||| ||| | || || || |||
Sbjct 2199 AGCATGTCCTGCAGTTTGTTCGCCTCGTGAGATCCATTGACAATGTAGCGGTCATTCTTG 2140
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484
||| | ||| || || || |||||||| || || || |||| || ||
Sbjct 2139 GCATCAAACTGGGTCTGGGCACCCAGCTCACAGCCAAAAAACTTGGTGGG 2090
Score = 104 bits (114), Expect = 2e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || || |||||||| || ||||||| |||||| || | ||||||||||||
Sbjct 7293 AGGTCAGTTTCTGGATTGTCACACTCAGGACACAGCACAAATTTTCTGATGAAACCATCC 7234
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| |||||| | || | ||||| || || ||||| ||| | || || || |||
Sbjct 7233 AGCATGTCCTGCAGTTTGTTCGCCTCGTGAGATCCATTGACAATGTAGCGGTCATTCTTG 7174
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484
||| | ||| || || || |||||||| || || || |||| || ||
Sbjct 7173 GCATCAAACTGGGTCTGGGCACCCAGCTCACAGCCAAAAAACTTGGTGGG 7124
>seq7938
Length=58116
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || | || ||||| ||||| ||| | || |||||| |
Sbjct 33733 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 33792
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || ||||| ||||| |||||| | ||| || ||
Sbjct 33793 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 33852
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | |||||| ||||||||||| |||| | | || || | || ||||||
Sbjct 33853 CAGAGGCTGATCTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 33912
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500
|| || || || || || ||||| ||||| | | || |||||||||
Sbjct 33913 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGAGGGGGA 33960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412443059362037
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |