Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq7938 100 2e-16 >seq7938 Length=58116 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 33733 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 33792 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 33793 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 33852 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | |||||| ||||||||||| || | | || || | ||||||||| Sbjct 33853 CAGAGGCTGATCTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 33912 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 || || |||||||| || ||||| ||||| | | | ||||||||| Sbjct 33913 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGAGGGGGA 33960 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || |||||||| || | || ||||| ||||| ||| | || |||| | Sbjct 30390 AAAATGCAGATCTTTGTCAAGACACTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 30449 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||| || | | | || || ||||| || ||||| ||| | ||| || Sbjct 30450 AGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGAC 30509 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || || |||||||| || | | || || | |||||| Sbjct 30510 CAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTAC 30569 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 ||||| || |||||||| || ||||| ||||| || || Sbjct 30570 AACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 30608 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 30621 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 30680 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || ||||| ||| | ||| || ||| Sbjct 30681 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 30740 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 30741 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 30800 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 30801 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 30836 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 30849 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 30908 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || ||||| ||| | ||| || ||| Sbjct 30909 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 30968 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 30969 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 31028 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 31029 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 31064 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 31077 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 31136 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || ||||| ||| | ||| || ||| Sbjct 31137 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 31196 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 31197 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 31256 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 31257 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 31292 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 31305 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 31364 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 31365 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 31424 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 31425 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 31484 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 31485 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 31520 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 32137 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 32196 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 32197 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 32256 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 32257 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 32316 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 32317 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 32352 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 32365 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 32424 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 32425 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 32484 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 32485 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 32544 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 32545 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 32580 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 32593 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 32652 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 32653 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 32712 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 32713 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 32772 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 32773 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 32808 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 32821 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 32880 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || ||||| ||| | ||| || ||| Sbjct 32881 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 32940 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 32941 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 33000 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 33001 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 33036 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 33049 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 33108 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 33109 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 33168 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 33169 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 33228 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 33229 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 33264 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 33277 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 33336 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 33337 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 33396 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 33397 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 33456 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 33457 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 33492 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 33505 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 33564 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| || ||| Sbjct 33565 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 33624 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 33625 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 33684 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGA 107771 || || |||||||| || ||||| ||||| || || Sbjct 33685 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 33720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398491740417001