Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1537 104 2e-16 seq1185 98.7 7e-15 >seq1537 Length=339721 Score = 104 bits (114), Expect = 2e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| ||||||||||||||||||||| || |||| ||||||||| ||||| | | Sbjct 16258 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAAAACATTTAGACCTGAA 16199 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| | || || || || || ||||| | || ||||| || || || || || || || Sbjct 16198 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 16139 Query 282464 ATAACGGCATCTGTTAC 282480 | ||| || | ||| || Sbjct 16138 ACAACAGCGTTTGTAAC 16122 >seq1185 Length=427606 Score = 98.7 bits (108), Expect = 7e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | | Sbjct 10800 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 10741 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| | || || || || || ||||| | || ||||| || || || || || || || Sbjct 10740 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 10681 Query 282464 ATAACGGCATCTGTTAC 282480 | ||| || | ||| || Sbjct 10680 ACAACAGCGTTTGTAAC 10664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3736741572837234