Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq1580 102 3e-18 seq1236 100 9e-18 seq21070 98.7 3e-17 seq14540 98.7 3e-17 seq3890 98.7 3e-17 seq3592 98.7 3e-17 seq2599 98.7 3e-17 seq932 98.7 3e-17 seq610 98.7 3e-17 seq14358 95.1 4e-16 seq13659 82.4 2e-12 >seq1580 Length=225455 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 1941 TGGCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 1882 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1881 TCCCGGGTTTCGGC 1868 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 5960 TGGCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 5901 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 5900 TCCCGGGTTTCGGC 5887 >seq1236 Length=406384 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 241615 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 241674 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 241675 CCCGGGTTTCGGC 241687 >seq21070 Length=10372 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3030 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3089 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3090 CCGGGTTTCGGC 3101 >seq14540 Length=19552 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1168 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1227 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1228 CCGGGTTTCGGC 1239 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 11594 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11653 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11654 CCGGGTTTCGGC 11665 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 12804 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 12863 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 12864 CCGGGTTTCGGC 12875 >seq3890 Length=87988 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 18414 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 18473 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 18474 CCGGGTTTCGGC 18485 >seq3592 Length=95140 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 65335 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 65276 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 65275 CCGGGTTTCGGC 65264 >seq2599 Length=172150 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 109818 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 109759 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 109758 CCGGGTTTCGGC 109747 >seq932 Length=190511 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 154895 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 154836 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 154835 CCGGGTTTCGGC 154824 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 156753 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 156694 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 156693 CCGGGTTTCGGC 156682 >seq610 Length=253017 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 238151 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 238210 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 238211 CCGGGTTTCGGC 238222 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 238445 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 238504 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 238505 CCGGGTTTCGGC 238516 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 248339 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 248398 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 248399 CCGGGTTTCGGC 248410 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||| |||||| |||||| | | Sbjct 248633 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCGTTGGTTCGATC 248692 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 248693 CCGGGTTTCGGC 248704 >seq14358 Length=33754 Score = 95.1 bits (104), Expect = 4e-16 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| | Sbjct 9365 TGGCTGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 9424 Query 2827 CCCCGGGCTT 2836 || ||| || Sbjct 9425 TCCTGGGTTT 9434 Score = 80.6 bits (88), Expect = 8e-12 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| ||||||| ||||||||| ||||||||||| ||||||||||||||||| | Sbjct 6930 TGGCAGAAACAGCTCAGCTGGGAGAGCGTTAGACTGAAGGTCTAAAGGTCCCTGGTTTGA 6989 Query 2827 CCCCGGGCTTCAGC 2840 || ||| ||| || Sbjct 6990 TCCTGGGTTTCGGC 7003 >seq13659 Length=21444 Score = 82.4 bits (90), Expect = 2e-12 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||| | ||||||| ||||||||||||| ||||||||| |||||||| Sbjct 18554 TGGCCGAAATAGCTCAGCTAGGAGAGCGTTAGACTGAAGATATAAAGGTCCGTGGTTCAA 18613 Query 2827 CCCCG 2831 |||| Sbjct 18614 TCCCG 18618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15835868723805