Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq18171 84.2 3e-11 seq3116 84.2 3e-11 seq16166 82.4 9e-11 >seq18171 Length=35654 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875 || || ||| ||| || || ||||| ||||| ||||| || ||| || | ||||| Sbjct 27526 GCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTG 27467 Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935 ||||| ||||| |||||||| || || ||||||||||||||| ||| || |||||| Sbjct 27466 AAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 27407 Query 94936 GGAC 94939 | || Sbjct 27406 GTAC 27403 >seq3116 Length=119845 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875 || || ||| ||| || || ||||| ||||| ||||| || ||| || | ||||| Sbjct 115529 GCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTG 115470 Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935 ||||| ||||| |||||||| || || ||||||||||||||| ||| || |||||| Sbjct 115469 AAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 115410 Query 94936 GGAC 94939 | || Sbjct 115409 GTAC 115406 >seq16166 Length=16622 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669 |||| | || || ||||| |||||| || ||| | |||||||| ||| || | Sbjct 1050 TCGCCATGTACCTGGAGCCCTGGCACTTTGACATCTTCGAGTTCCTGGAGCTGAAGAAGA 991 Query 104670 ACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 104729 || || | |||||| |||| ||||||||||||| ||| |||||||| || || | Sbjct 990 ACACGGGGAAGGAGGAGCAGCGGGCTCGCGATCTCTTCTACGCCCTCTGGATCCCCGACC 931 Query 104730 TCTTCATGAAGAGAGTTGAG 104749 ||||||||||||| || ||| Sbjct 930 TCTTCATGAAGAGGGTGGAG 911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582683306191160