Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq18171 84.2 3e-11
seq3116 84.2 3e-11
seq16166 82.4 9e-11
>seq18171
Length=35654
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| || ||| ||| || || ||||| ||||| ||||| || ||| || | |||||
Sbjct 27526 GCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTG 27467
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
||||| ||||| |||||||| || || ||||||||||||||| ||| || ||||||
Sbjct 27466 AAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 27407
Query 94936 GGAC 94939
| ||
Sbjct 27406 GTAC 27403
>seq3116
Length=119845
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| || ||| ||| || || ||||| ||||| ||||| || ||| || | |||||
Sbjct 115529 GCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTG 115470
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
||||| ||||| |||||||| || || ||||||||||||||| ||| || ||||||
Sbjct 115469 AAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 115410
Query 94936 GGAC 94939
| ||
Sbjct 115409 GTAC 115406
>seq16166
Length=16622
Score = 82.4 bits (90), Expect = 9e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669
|||| | || || ||||| |||||| || ||| | |||||||| ||| || |
Sbjct 1050 TCGCCATGTACCTGGAGCCCTGGCACTTTGACATCTTCGAGTTCCTGGAGCTGAAGAAGA 991
Query 104670 ACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 104729
|| || | |||||| |||| ||||||||||||| ||| |||||||| || || |
Sbjct 990 ACACGGGGAAGGAGGAGCAGCGGGCTCGCGATCTCTTCTACGCCCTCTGGATCCCCGACC 931
Query 104730 TCTTCATGAAGAGAGTTGAG 104749
||||||||||||| || |||
Sbjct 930 TCTTCATGAAGAGGGTGGAG 911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582683306191160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |