Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq18090 111 2e-19
seq18171 102 9e-17
seq3116 102 9e-17
seq16166 98.7 1e-15
seq36092 87.8 2e-12
seq8880 87.8 2e-12
seq1886 87.8 2e-12
>seq18090
Length=13718
Score = 111 bits (122), Expect = 2e-19
Identities = 84/99 (85%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312
||||||||||| |||| |||||||| |||||||| |||||||||||||| ||||| |||
Sbjct 7406 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 7347
Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351
||||||| | ||||||||| | ||||||| ||||||
Sbjct 7346 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGGG 7308
Score = 105 bits (116), Expect = 7e-18
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713
||||||||||||| | ||||||||| | ||||||| ||| ||||| ||||||||||||
Sbjct 7309 CCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGTAGATGCCC 7368
Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751
||||| |||||||||||| || | |||||| |||||
Sbjct 7369 TCGATGCTGTCGTCCTTCATGGCCAGCAGGAAACAGCT 7406
Score = 102 bits (112), Expect = 9e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429
|||| ||| ||| |||||||||||| |||||||| ||||| |||||||||||| |
Sbjct 5854 TCTCCACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCC 5913
Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489
|| |||||| | ||| |||| |||||| || || || | |||||| |||||
Sbjct 5914 GCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCC 5973
Query 79490 ACGGCTCCAGATAGATGGCGAACG 79513
| |||||||| || ||||||||||
Sbjct 5974 AGGGCTCCAGGTACATGGCGAACG 5997
Score = 93.3 bits (102), Expect = 5e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 79080 CTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCC 79139
||||||| ||| | ||| | ||| || ||||||| || |||||||||||||
Sbjct 4961 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 5020
Query 79140 GATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCC 79199
| ||||| |||||||||||| ||| ||||||||||||||| |||||| ||||| ||
Sbjct 5021 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCC 5080
Query 79200 GGTCTC 79205
|||||
Sbjct 5081 CGTCTC 5086
Score = 89.7 bits (98), Expect = 6e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 19491 CGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCC 19550
|||||||||| ||||| ||||| |||||| ||| || | || ||||| || |||
Sbjct 5997 CGTTCGCCATGTACCTGGAGCCCTGGCACTTTGACATCTTCGAGTTCCTGGAGCTGAAGA 5938
Query 19551 TGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGG 19610
|||| ||| | |||||| ||| ||||||||||||| ||| | ||||| || |
Sbjct 5937 AGAACACGGGGAAGGAGGAGCAGCGGGCTCGCGACCTCTTCTACGCCCTCTGGATCCCCG 5878
Query 19611 ACCTATTCATGGAGAAGGTTGAGA 19634
|||| |||||| ||| ||| ||||
Sbjct 5877 ACCTCTTCATGAAGAGGGTGGAGA 5854
>seq18171
Length=35654
Score = 102 bits (112), Expect = 9e-17
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062
|||||||| ||||| ||||| || ||||| || || |||||||| || || || |||
Sbjct 27514 GTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTGAAGAAACGAGGC 27455
Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111
|||||||||||||||| |||||||||||||| || ||| |||||||
Sbjct 27454 CTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 27406
Score = 91.5 bits (100), Expect = 2e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 60339 GTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTT 60398
||| | ||||| ||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct 26095 GTGGAGAACCCCTTCGACTTCATGGAGAACATCTCCCTGGAGGGGAAGACCAACTTCTTT 26036
Query 60399 GAGAAGCGGGTCGGGGATTA 60418
|||||||| || ||||| ||
Sbjct 26035 GAGAAGCGTGTGGGGGAGTA 26016
>seq3116
Length=119845
Score = 102 bits (112), Expect = 9e-17
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062
|||||||| ||||| ||||| || ||||| || || |||||||| || || || |||
Sbjct 115517 GTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGCTGAAGAAACGAGGC 115458
Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111
|||||||||||||||| |||||||||||||| || ||| |||||||
Sbjct 115457 CTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 115409
>seq16166
Length=16622
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429
|||| ||| ||| |||||||||||| |||||||| ||||| |||||| ||||| |
Sbjct 910 TCTCCACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCC 969
Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489
|| |||||| | ||| |||| |||||| || || || | |||||| |||||
Sbjct 970 GCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCC 1029
Query 79490 ACGGCTCCAGATAGATGGCGAACG 79513
| |||||||| || ||||||||||
Sbjct 1030 AGGGCTCCAGGTACATGGCGAACG 1053
Score = 93.3 bits (102), Expect = 5e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 79080 CTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCC 79139
||||||| ||| | ||| | ||| || ||||||| || |||||||||||||
Sbjct 9 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 68
Query 79140 GATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCC 79199
| ||||| |||||||||||| ||| ||||||||||||||| |||||| ||||| ||
Sbjct 69 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCC 128
Query 79200 GGTCTC 79205
|||||
Sbjct 129 CGTCTC 134
>seq36092
Length=2431
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 59989 TAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047
|||| ||||| ||| || |||||||||||||||||||| ||||| | | || ||||||
Sbjct 1273 TAGCCTTTGC-TGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 1331
Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097
| || ||| | || || ||||| || || | |||||||||||||||||
Sbjct 1332 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGAT 1381
>seq8880
Length=37550
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 59989 TAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047
|||| ||||| ||| || |||||||||||||||||||| ||||| | | || ||||||
Sbjct 863 TAGCCTTTGC-TGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 805
Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097
| || ||| | || || ||||| || || | |||||||||||||||||
Sbjct 804 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGAT 755
>seq1886
Length=180247
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 59989 TAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047
|||| ||||| ||| || |||||||||||||||||||| ||||| | | || ||||||
Sbjct 87460 TAGCCTTTGC-TGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 87402
Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097
| || ||| | || || ||||| || || | |||||||||||||||||
Sbjct 87401 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGAT 87352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547981698738960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |