Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq36092 91.5 2e-13
seq1886 91.5 2e-13
seq8880 89.7 6e-13
seq7748 89.7 6e-13
seq18090 87.8 2e-12
seq73373 84.2 2e-11
seq18171 84.2 2e-11
>seq36092
Length=2431
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| |||| || || || |||| || |||||||| || || | |||||||
Sbjct 1393 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 1334
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
||||| ||||||| | || || ||| ||||||||| ||||| || ||||||||
Sbjct 1333 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 1274
Query 74892 ACAAGGCG 74899
|| | |||
Sbjct 1273 ACCACGCG 1266
>seq1886
Length=180247
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| |||| || || || |||| || |||||||| || || | |||||||
Sbjct 87340 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 87399
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
||||| ||||||| | || || ||| ||||||||| ||||| || ||||||||
Sbjct 87400 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 87459
Query 74892 ACAAGGCG 74899
|| | |||
Sbjct 87460 ACCACGCG 87467
>seq8880
Length=37550
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| |||| || || || |||| || |||||||| || || | |||||||
Sbjct 743 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 802
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
||||| ||||||| | || || ||| ||||||||| ||||| || ||||||||
Sbjct 803 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 862
Query 74892 AC 74893
||
Sbjct 863 AC 864
>seq7748
Length=43948
Score = 89.7 bits (98), Expect = 6e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | |||||||| |||||||| || |||||| || || |||||
Sbjct 8958 GTGAAGATGTATCGAGGGCTGGCCGAGTCCTTGCCTCCATGCAGCCGGGTGCCGAACTGG 8899
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCA 152140
|| |||| || ||||| ||||||||| |||||| || ||||| ||||
Sbjct 8898 CCCAGCGGCTGAAGCAGGTTCAGGTTGTTGCTGCCCACAAAGTTCTGCGCCA 8847
>seq18090
Length=13718
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| |||
Sbjct 7406 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 7347
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427
|||| |||| ||||||||| | | || || |||||
Sbjct 7346 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 7309
>seq73373
Length=408
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363
||||||||||||||| | ||| |||||||| ||||| || | || || ||||| ||
Sbjct 138 AGTGAAAATGTAACGGGGGCTGGCAGCATCTTTGCCCCCGTTGATGCGGGTGCCGAACTG 197
Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423
|| |||| || || ||| | ||||||| |||||||||||| || |||| ||| ||
Sbjct 198 GCCGAGTGGCTGCAGGATGTTGACGTTGTTGCTGCCCACAAAGTTCTGTGCCAGGTTCAC 257
Query 117424 AATCGT 117429
|| ||
Sbjct 258 GATGGT 263
>seq18171
Length=35654
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || || ||||| ||||| |||||||||||||| |||| ||||||||||||||
Sbjct 26016 TACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGTTCTCCATG 26075
Query 74523 CAGTCGAAAGGGTTCT 74538
||||||| |||||||
Sbjct 26076 AAGTCGAAGGGGTTCT 26091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546674194598200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |