Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq36092 91.5 2e-13 seq1886 91.5 2e-13 seq8880 89.7 6e-13 seq7748 89.7 6e-13 seq18090 87.8 2e-12 seq73373 84.2 2e-11 seq18171 84.2 2e-11 >seq36092 Length=2431 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| |||| || || || |||| || |||||||| || || | ||||||| Sbjct 1393 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 1334 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 ||||| ||||||| | || || ||| ||||||||| ||||| || |||||||| Sbjct 1333 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 1274 Query 74892 ACAAGGCG 74899 || | ||| Sbjct 1273 ACCACGCG 1266 >seq1886 Length=180247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| |||| || || || |||| || |||||||| || || | ||||||| Sbjct 87340 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 87399 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 ||||| ||||||| | || || ||| ||||||||| ||||| || |||||||| Sbjct 87400 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 87459 Query 74892 ACAAGGCG 74899 || | ||| Sbjct 87460 ACCACGCG 87467 >seq8880 Length=37550 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| |||| || || || |||| || |||||||| || || | ||||||| Sbjct 743 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 802 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 ||||| ||||||| | || || ||| ||||||||| ||||| || |||||||| Sbjct 803 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 862 Query 74892 AC 74893 || Sbjct 863 AC 864 >seq7748 Length=43948 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | |||||||| |||||||| || |||||| || || ||||| Sbjct 8958 GTGAAGATGTATCGAGGGCTGGCCGAGTCCTTGCCTCCATGCAGCCGGGTGCCGAACTGG 8899 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCA 152140 || |||| || ||||| ||||||||| |||||| || ||||| |||| Sbjct 8898 CCCAGCGGCTGAAGCAGGTTCAGGTTGTTGCTGCCCACAAAGTTCTGCGCCA 8847 >seq18090 Length=13718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| ||| Sbjct 7406 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 7347 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 |||| |||| ||||||||| | | || || ||||| Sbjct 7346 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 7309 >seq73373 Length=408 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 ||||||||||||||| | ||| |||||||| ||||| || | || || ||||| || Sbjct 138 AGTGAAAATGTAACGGGGGCTGGCAGCATCTTTGCCCCCGTTGATGCGGGTGCCGAACTG 197 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || |||| || || ||| | ||||||| |||||||||||| || |||| ||| || Sbjct 198 GCCGAGTGGCTGCAGGATGTTGACGTTGTTGCTGCCCACAAAGTTCTGTGCCAGGTTCAC 257 Query 117424 AATCGT 117429 || || Sbjct 258 GATGGT 263 >seq18171 Length=35654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || || || || ||||| ||||| |||||||||||||| |||| |||||||||||||| Sbjct 26016 TACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGTTCTCCATG 26075 Query 74523 CAGTCGAAAGGGTTCT 74538 ||||||| ||||||| Sbjct 26076 AAGTCGAAGGGGTTCT 26091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546674194598200