Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq6876 333 3e-86 seq1021 288 1e-72 seq584 127 3e-24 seq1335 89.7 7e-13 >seq6876 Length=59938 Score = 333 bits (368), Expect = 3e-86 Identities = 479/672 (71%), Gaps = 9/672 (1%) Strand=Plus/Minus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| || |||| | ||| |||||||| ||||| |||||| ||||||||||| Sbjct 28256 CCGCTGAGCCGCGAGGAGGCCCGGTTCCCCATCGCGTACTCCATCGTGGTCCACCACAAG 28197 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||| ||| |||||| | || ||||||||| ||||||| || |||||||| ||||||||| Sbjct 28196 ATCCAGACCTTCGAGAGGCTGCTGAGGGCCGTCTACGCGCCCCAGAACCTGTACTGCGTC 28137 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAG-TTCATCCGGGGCGTCTCGGCCATCGCCAGGTG 13849 ||||||||| |||| | | || | | ||| || || ||| | |||||| || Sbjct 28136 CACGTGGACCGCAAGGC-GCCGTCCACCTTCCTCTCGGCCGTGCAGCAGATCGCCTCCTG 28078 Query 13850 CTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCG 13909 |||| ||||| | | ||| ||| ||| | ||||||||||| | |||||| || Sbjct 28077 CTTCGACAACGTCTTCATCGCCAGCCGCCTGGAGAGCGTGGTGTACGCCAGCTGGAGCCG 28018 Query 13910 CGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTA 13969 |||||||||||||||| ||||||| |||||| || | | || | |||||||| Sbjct 28017 GGTGCAGGCCGACCTCAACTGCATGGGCGACCTGTACAACCACAGCGCCCCCTGGAGGTA 27958 Query 13970 CCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGC 14029 | | ||||||||||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 27957 CTTCGTCAACCTGTGCGGCCAGGACTTCCCGCTGAAGACCAACCTGGAGATGGTGCGCCA 27898 Query 14030 GCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCT 14089 ||||| ||||||| || |||||| |||||||| ||| | ||| | |||| Sbjct 27897 GCTGAGGGCCCTGCAGGGGAAGAACAGCCTGGAGACGGAGAAGACGCCGCCCTCCAAGGA 27838 Query 14090 GCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGT--GGTGGTCAACACCGGC 14147 | || | |||| || ||| |||||| ||||| | | || || || | Sbjct 27837 GGCGCGGTGGAAGAAGCGGTACGAGGTGGCGGACGGCGCCATCCGGAGG-----ACGGAG 27783 Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207 | | ||||||||||||| || || || || || || ||||| || ||| | | | Sbjct 27782 AAGGACAAGGCCCCGCCTCCCGTCGAGACGCCGATGTTCGCGGGCGGGGCCTACATCGTG 27723 Query 14208 GTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCAC 14267 |||| ||||| |||||| |||||| || ||||| || | | ||| ||| | Sbjct 27722 GTCAGCCGGGCGTTCGTCCGCTTCGTGCTGGAGGACCCCAGGGCGCGGCGGCTGATGGAG 27663 Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327 ||| ||||| ||||||||||||||| |||||||||||| ||||||| ||| | Sbjct 27662 TGGGCGCAGGACGGCTACAGCCCCGACGAGTTCCTGTGGGCCACGCTGCAGAGGATGCCC 27603 Query 14328 GGGACGCCCGGG 14339 || |||||||| Sbjct 27602 GGCGCGCCCGGG 27591 Score = 158 bits (174), Expect = 2e-33 Identities = 305/449 (68%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 14152 ACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCA 14211 ||||||||||||| || || || || || || ||||| || ||| | | ||||| Sbjct 30538 ACAAGGCCCCGCCTCCCGTCGAGACGCCGATGTTCGCGGGCGGGGCCTACATCGTGGTCA 30479 Query 14212 CCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGT 14271 ||||| |||||| |||||| || ||||| || | | ||| ||| | ||| Sbjct 30478 GCCGGGCGTTCGTCCGCTTCGTGCTGGAGGACCCCAGGGCGCGGCGGCTGATGGAGTGGG 30419 Query 14272 TCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGA 14331 ||||| ||||||||||||||| |||||||||||| ||||||| ||| ||| Sbjct 30418 CGCAGGACGGCTACAGCCCCGACGAGTTCCTGTGGGCCACGCTGCAGAGGATGCCCGGCG 30359 Query 14332 CGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCA 14391 |||||||| || ||| || | |||||| | ||| | ||| | | Sbjct 30358 CGCCCGGGTCCATACCCAGCAACCACCGCTACGACGTGACCGACGTCAACGCCCTCGCCC 30299 Query 14392 GGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTT 14451 || | || |||||||| |||| ||||||| ||| || ||| |||||||||||| Sbjct 30298 GGCTGGTGAAGTGGCAGTACTTTGAGGGGGCGGAGTCGAAGGGCGCCATGTACCCGCCTT 30239 Query 14452 GCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG---C 14508 || ||| |||||| | |||||||| ||| ||| ||||||| || ||| | Sbjct 30238 GCAGGGGCCACCACGTGCGATCCATCTGCGTCTACGGCGTCGGCGACCTGGGCTGGATGC 30179 Query 14509 TGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGTTCGCCG 14568 || ||| ||||| || |||||||||||||||||| ||| || ||| |||||| Sbjct 30178 TGCAGAAG---CCGCAGCTCTTCGCCAACAAGTTCGACACCGACACCGACCCCATCGCCG 30122 Query 14569 TGCGCTGTCTGGACGAGGACGTGCGCACC 14597 ||| ||| ||||| || | |||| ||| Sbjct 30121 TGCACTGCCTGGAGAAGTATTTGCGGACC 30093 >seq1021 Length=130879 Score = 288 bits (318), Expect = 1e-72 Identities = 608/893 (68%), Gaps = 22/893 (2%) Strand=Plus/Minus Query 13676 GAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGA 13735 |||| ||| ||| | ||||| |||||||| ||||| || ||| ||||| | || ||||| Sbjct 53674 GAGCGCGGAGGAGATGGAGTTCCCCATCGCGTACTCCATGGTGGTCCACGAGAAAATCGA 53615 Query 13736 GATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGT 13795 |||||||||| | |||||| |||| || |||| || || ||| | |||||||| ||||| Sbjct 53614 GATGTTCGAGAGGCTCCTGCGGGCTATATACGTGCCCCACAACGTGTACTGCGTGCACGT 53555 Query 13796 GGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCC 13855 |||| ||||||| || | |||| | | |||| || ||||| | ||| | || Sbjct 53554 GGACCGCAAGTCCCCAGAGGCCTTCAGGCTTGCCGTCCAGGGCATCGTCTCCTGCCTGCC 53495 Query 13856 TAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCA 13915 |||||| ||||| | ||||| | |||| | |||| |||||| || ||||| Sbjct 53494 CAACGTGTTTGTGGCCAGCAGGCTGGAGAGCGTGATATACGCGTCCTGGTCCCGGGTGCA 53435 Query 13916 GGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAGGTACCTG 13973 || ||||||| ||||||| |||||| || | || || ||| ||||||||||||| Sbjct 53434 AGCGGACCTCAACTGCATGGAGGACCTCATGAAG--TCGCCGGTCCGGTGGAGGTACCTG 53377 Query 13974 CTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTG 14033 |||||| ||||| | |||||||| |||| || ||| |||||||||||| || || Sbjct 53376 CTCAACACCTGCGGCACCGACTTCCCCATCAAAACGAACGCGGAGATCGTGCGAGCTCTC 53317 Query 14034 AAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCAC 14093 || || ||||| |||| | ||||| ||| | | | |||| ||||| | Sbjct 53316 AAACAGCTCAACGGCAGGAACAGCATGGAGTCCGAAGAGACGAACAACTACAAGAAAGGC 53257 Query 14094 CGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGT--GGTCAACACCGGCAGGA 14151 ||| | | | | ||| ||| | || || |||| | || ||| ||| || Sbjct 53256 CGCTGGATGTACCGCCACAACGTGAC--GC-ACGCCGTGATCAGGACAA-ACC----TGA 53205 Query 14152 ACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCA 14211 | |||| || || || |||| | ||| || || | || ||||| ||||| | ||||| Sbjct 53204 AGAAGGATCCTCCCCCCATCAGCACCCCTATGTTCTCTGGGAACGCCTACTTCGTGGTCA 53145 Query 14212 CCCGGGAGTTCGTG-GACTTCGTCCTCAAGGACGAGCCGGT--GGCCCTGCTCATGCACT 14268 |||||||||| ||| | | | || || | | || ||| || || ||||| | | Sbjct 53144 CCCGGGAGTTTGTGAGGCACCTGTCTGAAAG-CCAGGAGGTGCGGTCC--CTCATCGAGT 53088 Query 14269 GGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC- 14327 || |||| || |||||||||||||| ||||||||||||||| ||||||||||| | Sbjct 53087 GGGAGAAGGATACCTACAGCCCCGACGAACACCTGTGGGCCACCCTGCAGAGAATGCCCT 53028 Query 14328 GGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387 | | || | |||||| || ||||||| | ||||||||| ||||| Sbjct 53027 CCGTCCCCGGCTCCTATCCCC-CCAACAGCAAGTACCAGCAGTCGGACATGGAGGCCATC 52969 Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447 | | | | || |||||| |||| || ||||| | | ||| || || | |||||| Sbjct 52968 GCCCGCCTGGTGAAGTGGAGCTACCTGGAAGGGGACGTGAGGAAGGGTGCGCCCTACCCG 52909 Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507 || ||| ||| | ||| ||| | ||| ||| ||| |||| ||| | | ||| Sbjct 52908 CCCTGCACCGGGACTCACCGAAGAGCCGTGTGCGTCTACGGCACCGGGGACCTCCACTGG 52849 Query 14508 CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGA 14560 || ||| | ||||| |||||||||||||| ||| ||| |||||| Sbjct 52848 ATGCTCAGCCAGCATCACCTTTTCGCCAACAAGTTTGACCCCGAAGTGGACGA 52796 >seq584 Length=114294 Score = 127 bits (140), Expect = 3e-24 Identities = 252/366 (69%), Gaps = 14/366 (4%) Strand=Plus/Plus Query 13668 AGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCAC 13727 || |||||||||| || || | |||| ||| | |||| | ||| ||| | ||| Sbjct 56177 AGCCCCCTGAGCCGCGAGGAAGAGGAGTACCCCCTGGCCTTC---ATCATGACCATACAC 56233 Query 13728 AAGA---TCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTAC 13784 ||| | |||||||||| ||| || || | ||| | || || ||||||||| ||||| Sbjct 56234 AAGGAGCTGGAGATGTTCGCGCGGCTGCTCCGCGCCGTGTATGCGCCGCAGAACGTCTAC 56293 Query 13785 TGCGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCA---TC 13841 ||||||||||||||| ||||| ||| | | | | ||||| | | || | | Sbjct 56294 TGCGTCCACGTGGACGCCAAG-GCGGAGCCCTGGT--ACCGGGCGGCCGTGGAGAGGCTG 56350 Query 13842 GCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGA-CGTGGTGTACGGCTC 13900 ||| | |||||||| ||||| ||||| || | | | || || ||| ||||| | Sbjct 56351 GCCGGCTGCTTCCCCAACGTCTTCCTGG-CCTCGGCCAGCGAGAGGGTGACGTACGCCGG 56409 Query 13901 CTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAA 13960 || || | ||||||||| ||| ||||||| |||||||| | || || || Sbjct 56410 CTTCTCCCGGCTCCAGGCCGACATCAACTGCATGCGGGACCTGGCCAGGTCGCCGGTGGC 56469 Query 13961 GTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGAT 14020 |||||| | || ||||||| ||||| ||||||||| ||| || |||||||||| | Sbjct 56470 CTGGAGGAAGGTGGTCAACCTCTGCGGCCAGGACTTCCCCATCATGAGCAACCTGGAGCT 56529 Query 14021 CGTGCG 14026 ||||| Sbjct 56530 GGTGCG 56535 >seq1335 Length=317200 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 13915 AGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGC 13974 |||| ||||| | |||| |||||||||| | ||||| || ||||||| |||| | Sbjct 41576 AGGCTGACCTTAACTGCCTGTCGGACCTCCTCAAGTCCCCGGTTAAGTGGAAGTACGTTA 41517 Query 13975 TCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGA 14034 ||||||||||||| ||||||||| |||| | ||||| | ||| | ||| || ||||| Sbjct 41516 TCAACCTGTGCGGCCAGGACTTCCCCCTCAGGTCCAACTTTGAGCTGGTGTCGGAGCTGA 41457 Query 14035 AG 14036 || Sbjct 41456 AG 41455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658086974083840