Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 165 7e-36
seq14962 159 3e-34
>seq2502
Length=134960
Score = 165 bits (182), Expect = 7e-36
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| |||||||||||||||||||| || || || || |||||||| ||||| |||||||||
Sbjct 28419 TGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACACCTAACCCC 28478
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||||| || || || || |||||||||||||||||||||| || ||||| |||
Sbjct 28479 ATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACATAGAACTGG 28538
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||| ||||| || |||||||| || || ||
Sbjct 28539 CACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 28579
Score = 165 bits (182), Expect = 7e-36
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|| || || |||||||| || ||||| |||||| |||| ||||| ||||| || ||
Sbjct 28579 GACCTGCCCCTGATGGCCCTGCCCCCCTGCCACGCCCTGTGCCAGTTCTATGTGTGTGAT 28520
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|||||||||||||||||||| || || || || ||||||||||||||||| ||||| |||
Sbjct 28519 GGGGAGCTGTCCTGCCAGCTGTACCAGCGGTCCGGAGACATGGGGTTAGGTGTGCCCTTC 28460
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || || || |||||||||||||||||||| ||
Sbjct 28459 AACATCGCCAGCTATGCCCTGCTCACGTACATGATCGCCCA 28419
>seq14962
Length=18771
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|| || || |||||||| || ||||| |||||| |||| ||||| ||||| || ||
Sbjct 8843 GACCTGCCCCTGATGGCCCTGCCCCCCTGCCACGCCCTGTGCCAGTTCTATGTGTGTGAT 8902
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|||||||||||||||||||| || || || || |||||||||||||| || ||||| |||
Sbjct 8903 GGGGAGCTGTCCTGCCAGCTGTACCAGCGGTCCGGAGACATGGGGTTGGGTGTGCCCTTC 8962
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || || || |||||||||||||||||||| ||
Sbjct 8963 AACATCGCCAGCTATGCCCTGCTCACGTACATGATCGCCCA 9003
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| |||||||||||||||||||| || || || || |||||||| ||||| || ||||||
Sbjct 9003 TGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACACCCAACCCC 8944
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||||| || || || || |||||||||||||||||||||| || ||||| |||
Sbjct 8943 ATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACATAGAACTGG 8884
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||| ||||| || |||||||| || || ||
Sbjct 8883 CACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 8843
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347
|||| | || || |||| ||||| ||| || ||||| || ||||| || | ||
Sbjct 7756 GGGGTCAACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGG 7815
Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407
|| || || ||| |||||||| | || || | ||||||| || || ||||||||
Sbjct 7816 ATCCCGTGATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGATTTGGGCCC 7875
Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| ||||| |||||||||||||||||||| || || ||
Sbjct 7876 TGTTTACGGTTTCCAGTGGAGACACTTTGGTGCTGAATA 7914
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||||||||||||||| ||||| || |||||||| || || ||||||
Sbjct 7914 TATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAATCCCCTTCCTCC 7855
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | || || | |||||||| ||| || || || || | || ||||| || |||
Sbjct 7854 CTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTC 7795
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057
|| || ||| ||||| |||| || || | ||||
Sbjct 7794 ACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCCC 7756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447818569794480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |