Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq14962 156 3e-33
seq2502 156 3e-33
seq38573 91.5 1e-13
seq15079 91.5 1e-13
seq1434 91.5 1e-13
>seq14962
Length=18771
Score = 156 bits (172), Expect = 3e-33
Identities = 133/164 (81%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
||||| |||| ||| || |||||||||||||| || | |||||||||||||| ||||||
Sbjct 9015 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 8956
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || | ||||||||| || |||| |||||| |||||||| || ||||| || || | |
Sbjct 8955 ACACCCAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 8896
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877
|| || ||||| |||| ||| ||||| || || |||||||| ||
Sbjct 8895 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAG 8852
Score = 111 bits (122), Expect = 1e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| || ||||||||||| ||||| || || |||| || || || ||||||| ||
Sbjct 7902 AAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAATCCCCTTCCTCCCTGTTAGTAAAT 7843
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| |||||||||||||| || | ||| || || || ||||| || || || || |||||
Sbjct 7842 CCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTCACACCTTTCTCC 7783
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| ||||||||||| ||||| |||||
Sbjct 7782 GACAGCTCTTTGGAATTTGTTGACCC 7757
>seq2502
Length=134960
Score = 156 bits (172), Expect = 3e-33
Identities = 133/164 (81%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
||||| |||| ||| || |||||||||||||| || | |||||||||||||| ||||||
Sbjct 28407 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 28466
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || | ||||||||| || |||| |||||| |||||||| || ||||| || || | |
Sbjct 28467 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 28526
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877
|| || ||||| |||| ||| ||||| || || |||||||| ||
Sbjct 28527 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAG 28570
>seq38573
Length=2010
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || ||
Sbjct 599 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 540
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| | |||||| ||||| |||||||||||||||
Sbjct 539 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 497
>seq15079
Length=27813
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || ||
Sbjct 3811 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 3752
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| | |||||| ||||| |||||||||||||||
Sbjct 3751 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 3709
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || ||
Sbjct 10245 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 10186
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| | |||||| ||||| |||||||||||||||
Sbjct 10185 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 10143
>seq1434
Length=271241
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || ||
Sbjct 16093 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 16152
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| | |||||| ||||| |||||||||||||||
Sbjct 16153 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 16195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405771106420174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |