Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq14962 156 3e-33 seq2502 156 3e-33 seq38573 91.5 1e-13 seq15079 91.5 1e-13 seq1434 91.5 1e-13 >seq14962 Length=18771 Score = 156 bits (172), Expect = 3e-33 Identities = 133/164 (81%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||| Sbjct 9015 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 8956 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || | ||||||||| || |||| |||||| |||||||| || ||||| || || | | Sbjct 8955 ACACCCAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 8896 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 || || ||||| |||| ||| ||||| || || |||||||| || Sbjct 8895 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAG 8852 Score = 111 bits (122), Expect = 1e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || ||||||||||| ||||| || || |||| || || || ||||||| || Sbjct 7902 AAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAATCCCCTTCCTCCCTGTTAGTAAAT 7843 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||||||||||| || | ||| || || || ||||| || || || || ||||| Sbjct 7842 CCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTCACACCTTTCTCC 7783 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || ||||||||||| ||||| ||||| Sbjct 7782 GACAGCTCTTTGGAATTTGTTGACCC 7757 >seq2502 Length=134960 Score = 156 bits (172), Expect = 3e-33 Identities = 133/164 (81%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||| Sbjct 28407 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 28466 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || | ||||||||| || |||| |||||| |||||||| || ||||| || || | | Sbjct 28467 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 28526 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 || || ||||| |||| ||| ||||| || || |||||||| || Sbjct 28527 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAG 28570 >seq38573 Length=2010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || || Sbjct 599 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 540 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 539 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 497 >seq15079 Length=27813 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || || Sbjct 3811 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 3752 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 3751 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 3709 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || || Sbjct 10245 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 10186 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 10185 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 10143 >seq1434 Length=271241 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || || Sbjct 16093 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 16152 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 16153 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 16195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405771106420174