Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq14962 147 2e-30
seq2502 147 2e-30
>seq14962
Length=18771
Score = 147 bits (162), Expect = 2e-30
Identities = 137/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||
Sbjct 9015 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 8956
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || | ||||||||| || |||| |||||| ||||| || || ||||| ||||| |
Sbjct 8955 ACACCCAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 8896
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381
|| || ||||| || | ||||||||| || || || ||||| ||| || ||||
Sbjct 8895 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 8842
Score = 118 bits (130), Expect = 8e-22
Identities = 127/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
|||||| |||| || || || || || ||||| ||||| ||||| || || |||| ||
Sbjct 7924 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAATC 7865
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|| || ||||||| || || |||||||||||||| || | ||| || || || ||
Sbjct 7864 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 7805
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
||| || || || || ||||| || ||||||||||| ||||| |||||
Sbjct 7804 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 7757
>seq2502
Length=134960
Score = 147 bits (162), Expect = 2e-30
Identities = 137/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||
Sbjct 28407 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 28466
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || | ||||||||| || |||| |||||| ||||| || || ||||| ||||| |
Sbjct 28467 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 28526
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381
|| || ||||| || | ||||||||| || || || ||||| ||| || ||||
Sbjct 28527 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 28580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369150492644879
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |