Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq7938 149 2e-30
seq11089 93.3 1e-13
seq3404 87.8 4e-12
>seq7938
Length=58116
Score = 149 bits (164), Expect = 2e-30
Identities = 166/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || |||||||| || || |||||||| |||||||| || |||
Sbjct 30624 CAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 30681
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || ||||| ||||||||||| || || || || |||||||
Sbjct 30682 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAGC 30741
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || |||| || |||
Sbjct 30742 AGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAACA 30801
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| || || || || ||||| | || || |||||||
Sbjct 30802 TCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGACTCAG 30841
Score = 149 bits (164), Expect = 2e-30
Identities = 166/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || |||||||| || || |||||||| |||||||| || |||
Sbjct 30852 CAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 30909
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || ||||| ||||||||||| || || || || |||||||
Sbjct 30910 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAGC 30969
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || |||| || |||
Sbjct 30970 AGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAACA 31029
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| || || || || ||||| | || || |||||||
Sbjct 31030 TCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGACTCAG 31069
Score = 149 bits (164), Expect = 2e-30
Identities = 166/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || |||||||| || || |||||||| |||||||| || |||
Sbjct 31080 CAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 31137
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || ||||| ||||||||||| || || || || |||||||
Sbjct 31138 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAGC 31197
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || |||| || |||
Sbjct 31198 AGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAACA 31257
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| || || || || ||||| | || || |||||||
Sbjct 31258 TCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGACTCAG 31297
Score = 149 bits (164), Expect = 2e-30
Identities = 166/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || |||||||| || || |||||||| |||||||| || |||
Sbjct 32824 CAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGCG 32881
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || ||||| ||||||||||| || || || || |||||||
Sbjct 32882 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAGC 32941
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || |||| || |||
Sbjct 32942 AGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAACA 33001
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| || || || || ||||| | || || |||||||
Sbjct 33002 TCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGACTCAG 33041
Score = 136 bits (150), Expect = 1e-26
Identities = 169/229 (74%), Gaps = 7/229 (3%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || || || || || || || || || |||||||| ||||||||
Sbjct 30390 AAAATGC---AGATCTTTGTCAAGACACTGACTGGCAAGACCATCACCCTGGAGGTGGA- 30445
Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
|| ||| ||||||| |||||||| || ||||| ||||||||||| || || || |
Sbjct 30446 -GCCCAGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCC 30504
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| |||||||| | || ||||| ||||| || ||||| |||||||| | || || |||
Sbjct 30505 CAGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCG 30564
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
| || ||| |||| || || || || ||||| | || || |||||||
Sbjct 30565 ACTACAACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGACTCAG 30613
>seq11089
Length=28475
Score = 93.3 bits (102), Expect = 1e-13
Identities = 85/106 (80%), Gaps = 1/106 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| | ||||||||||| |||||||||||||||||| | |||
Sbjct 18150 CAGATCTTCGTGAAAACCTTGACAGGAAAAACCATCACCCTCGAGGTGGAACCCAGTGAC 18209
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG-AATC 178028
||||||||||| || || ||||| ||||| || ||||| ||||
Sbjct 18210 ACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGTAATC 18255
>seq3404
Length=165914
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || |||||||| | ||||| ||||| |||||||||||||||||| | |||
Sbjct 55292 CAGATATTTGTGAAAACGTTGACAGGGAAAACCATCACCCTCGAGGTGGAACCCAGCGAC 55351
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
||||||||||| || || ||||||||| || || |||||
Sbjct 55352 ACCATCGAGAATGTGAAGGCAAAGATTCAAGATAAGGAAGG 55392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202509574959546
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |