Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq206233 450 2e-121 seq155386 450 2e-121 seq58798 450 2e-121 seq172677 111 2e-19 seq133256 111 2e-19 >seq206233 Length=6715 Score = 450 bits (498), Expect = 2e-121 Identities = 1283/1962 (65%), Gaps = 25/1962 (1%) Strand=Plus/Plus Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 ||||| ||||| || |||| | |||||| || | || | || ||||| || || Sbjct 4192 TTCTTCATCTCCTCGCTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGGGGGTTG 4251 Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206 || | || || ||||| || | || || || ||||| || || ||||| || || || Sbjct 4252 ACGATCTGGAACTCTCCGGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGGCTCG 4311 Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 4312 ATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTGGGCATCGGGGCCAGCAGC 4371 Query 53267 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA-A 53324 | || || || | |||| | ||| || || || || || |||| | |||| | Sbjct 4372 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGCTTCC--AGTCCAGCA 4429 Query 53325 GATCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGA 53382 | || | || | | | || || || || || ||| | || Sbjct 4430 GGTCGGTGGG--CGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACAGGAGA 4487 Query 53383 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 53442 ||| | || || ||||| || || || | || || || || |||||||| | || Sbjct 4488 GCCTTCGTACGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCCTCCAGGGC 4547 Query 53443 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 53502 |||| || ||||| || ||||||| | || || || ||||| |||| ||||| Sbjct 4548 GGCGTAGTAGATGGTCTCAAAGATCTGAATGTTCAGCAGCTGAGCTTCGGGGCTTTCAAA 4607 Query 53503 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 53562 || ||| | ||| || || ||||| || || ||||| ||||| || || || || || Sbjct 4608 CGGGTAACGCATGAGGATGAAGGCGTCGGCCAAACCTTGTACACCGATTCCTATCGGCCT 4667 Query 53563 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 53622 || | ||| || || | || ||||| || | ||||| | || || || || || || Sbjct 4668 GTGACGCTTGTTTGACTTCTCCGCTTCAGGCACGGGATAGAAGTTTATTTCAATGATCTT 4727 Query 53623 ATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT---TG 53679 || | ||| |||| || |||||| ||| ||| ||||| ||| ||||| || Sbjct 4728 GTTCAAGTTCTTGACGATGACTTTGGTCACGGCCTCTAGTTTTTTAAAGTCAAAAGTCTG 4787 Query 53680 TCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT- 53738 | | || ||||||| | || || || |||||||| || || |||||||| | Sbjct 4788 CTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGATTGCAGACCGCTACCTCGTC 4847 Query 53739 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797 | || || |||| | || || ||||| || || || |||||||| || | Sbjct 4848 GTGGCT--CGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGGACTTGATGCAGCCCAGG 4905 Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857 || || || || ||||| |||| || || || || || || ||| | |||||||||| | Sbjct 4906 TTCTGGTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCAGAT 4965 Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917 || ||||||| || ||||| || | ||| | ||||||| | | |||| | Sbjct 4966 TCTGTCTGGGACTCGATAATGGCGTGCCACAGCTGCTGAGCCTTCACCACGCGTTTG-AC 5024 Query 53918 CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973 || | ||| ||| | || |||| | || |||||||| || ||||| | Sbjct 5025 CT-TCCCCTCCTTCTCAAAGGAGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTC 5081 Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 ||||| || || || || |||||||||| ||||| ||| || || ||| | Sbjct 5082 GTCCAGCCCGGGGCACTCGCTGGGACACATCAGGGACCAGTCTTGGTTGCTCTCCACCCT 5141 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCT 54092 |||| || || || || ||||| || || ||| || || ||||||| ||| || |||| Sbjct 5142 CCTCATGAACAGGTCGGGGATCCACAGGGC-ATAGAAAAGGTCTCTGGCTCTCTGCTCCT 5200 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | || || || ||||| || || || ||||| | | | |||| | ||||| || |||| Sbjct 5201 CCTTCCCAGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCA 5260 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 ||| |||| | | || || | ||||| || ||||| || | || | || |||| Sbjct 5261 GGTACATGGCGAAGGCCCCGGGTCTCTTGTTCCCGCCCTGGTCGACATAACGGGCCGTGT 5320 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 | || || ||||||| ||| || | | || ||||| || ||||| |||| ||| | Sbjct 5321 TGTTGTAGACTCTCAGCATGGGCACGAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGT 5380 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 |||| || | | | || || | | | ||| || || || ||| ||| |||| Sbjct 5381 AGCTCCCTGTTGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGATTTGGAGA 5440 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 | | |||||| | || || || || || ||||| || || || || || ||||| | Sbjct 5441 TGAGGGCGCATTGCTTCAAGGTGTCGTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGA 5500 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | || |||||||| |||| || | | | | || || ||||| || | |||||||| | Sbjct 5501 GCAGGAAACAGCTGGACAGCTGTGGCCTATTGGTCCCTGCATTGAAGAGCGTAGGAGAGG 5560 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || ||||| || || || || || ||||| |||||||| || | ||| || ||| Sbjct 5561 CGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATGTCCG 5620 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 || || || || || | || | ||| | ||||||||| || | ||| | | ||| Sbjct 5621 TTTCGTGGATCCCGACGGAAACCCTCATGAGCATGTGCTGCGGCCGCTCAGCCACTTTGC 5680 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 ||| || ||||||| |||||| |||| ||| || || ||||| ||||||| || | Sbjct 5681 CGTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGA 5740 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 54692 | |||| ||| |||| || | |||||||| || || | | | || | | | Sbjct 5741 AATCTCTGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTGTCGAGAATGATTTTGA 5800 Query 54693 TGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATA 54752 || | || | || ||||| || | |||| || ||||| ||||| | | Sbjct 5801 GCGTCGCCTTGGAGACCATGGGAGAGTGGCGCTGATTTAAGGGGTTGACGTAGTTGTACA 5860 Query 54753 AATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 54812 ||||| |||||| || || || | || || || | ||||| || ||||| || || | Sbjct 5861 GATCCTCCATCACGTCGCTGAACACCTTCTTCGTCTGCTTGTGCAGGTTTGAGACAGCGA 5920 Query 54813 TTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGG 54872 | | ||||| || ||||| || || ||||| | || || |||||| || ||||| | Sbjct 5921 TCCGTGCGGCGAGGATGGCGTAGTCGGGATGCTTAGTTGTGAGAGTGGCGGCGATTTCTG 5980 Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCA 54932 | | || ||||| | || || || || || || || || | || ||||| ||||||| Sbjct 5981 CGGCGAGCGTGTCGAGCTCCACGGTGGTGACGCCGTTGTACAAACCCTGGATCACCTTCA 6040 Query 54933 TAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATAC 54992 | | || | ||||| | | ||| ||| | ||||| || || || || | Sbjct 6041 TGGTGATCTGGGCCGGATCCACAAAGTCACAGTTGAGTCCATAGCACAACTTCTGGATGC 6100 Query 54993 GAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCAT 55034 |||| ||||||||||| ||||||||| |||| | ||||| Sbjct 6101 GAGAGGTGATTTTATCGAACATGACACGCTCCTGGCGTCCAT 6142 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || ||||| || ||||| || || |||| ||||| || ||||| | Sbjct 3812 TCCAGCCGTAGAAGTGCATGCTGGTTAGCTTTCCGTAGTTCGGCTCTGCGATGTGGATGT 3871 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| || || || || ||||||||||| || | ||| || ||||| || | || |||| Sbjct 3872 TCAGCGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGAGTATTGTCT 3931 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||||| |||||||| | ||||| | ||| |||||| Sbjct 3932 TCTGGGAGATTTCCCAAACGGTTTTATACAGCCGCTTCAGATCAACTGGAA 3982 >seq155386 Length=3452 Score = 450 bits (498), Expect = 2e-121 Identities = 1283/1962 (65%), Gaps = 25/1962 (1%) Strand=Plus/Plus Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 ||||| ||||| || |||| | |||||| || | || | || ||||| || || Sbjct 772 TTCTTCATCTCCTCGCTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGGGGGTTG 831 Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206 || | || || ||||| || | || || || ||||| || || ||||| || || || Sbjct 832 ACGATCTGGAACTCTCCGGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGGCTCG 891 Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 892 ATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTGGGCATCGGGGCCAGCAGC 951 Query 53267 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA-A 53324 | || || || | |||| | ||| || || || || || |||| | |||| | Sbjct 952 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGCTTCC--AGTCCAGCA 1009 Query 53325 GATCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGA 53382 | || | || | | | || || || || || ||| | || Sbjct 1010 GGTCGGTGGG--CGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACAGGAGA 1067 Query 53383 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 53442 ||| | || || ||||| || || || | || || || || |||||||| | || Sbjct 1068 GCCTTCGTACGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCCTCCAGGGC 1127 Query 53443 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 53502 |||| || ||||| || ||||||| | || || || ||||| |||| ||||| Sbjct 1128 GGCGTAGTAGATGGTCTCAAAGATCTGAATGTTCAGCAGCTGAGCTTCGGGGCTTTCAAA 1187 Query 53503 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 53562 || ||| | ||| || || ||||| || || ||||| ||||| || || || || || Sbjct 1188 CGGGTAACGCATGAGGATGAAGGCGTCGGCCAAACCTTGTACACCGATTCCTATCGGCCT 1247 Query 53563 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 53622 || | ||| || || | || ||||| || | ||||| | || || || || || || Sbjct 1248 GTGACGCTTGTTTGACTTCTCCGCTTCAGGCACGGGATAGAAGTTTATTTCAATGATCTT 1307 Query 53623 ATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT---TG 53679 || | ||| |||| || |||||| ||| ||| ||||| ||| ||||| || Sbjct 1308 GTTCAAGTTCTTGACGATGACTTTGGTCACGGCCTCTAGTTTTTTAAAGTCAAAAGTCTG 1367 Query 53680 TCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT- 53738 | | || ||||||| | || || || |||||||| || || |||||||| | Sbjct 1368 CTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGATTGCAGACCGCTACCTCGTC 1427 Query 53739 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797 | || || |||| | || || ||||| || || || |||||||| || | Sbjct 1428 GTGGCT--CGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGGACTTGATGCAGCCCAGG 1485 Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857 || || || || ||||| |||| || || || || || || ||| | |||||||||| | Sbjct 1486 TTCTGGTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCAGAT 1545 Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917 || ||||||| || ||||| || | ||| | ||||||| | | |||| | Sbjct 1546 TCTGTCTGGGACTCGATAATGGCGTGCCACAGCTGCTGAGCCTTCACCACGCGTTTG-AC 1604 Query 53918 CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973 || | ||| ||| | || |||| | || |||||||| || ||||| | Sbjct 1605 CT-TCCCCTCCTTCTCAAAGGAGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTC 1661 Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 ||||| || || || || |||||||||| ||||| ||| || || ||| | Sbjct 1662 GTCCAGCCCGGGGCACTCGCTGGGACACATCAGGGACCAGTCTTGGTTGCTCTCCACCCT 1721 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCT 54092 |||| || || || || ||||| || || ||| || || ||||||| ||| || |||| Sbjct 1722 CCTCATGAACAGGTCGGGGATCCACAGGGC-ATAGAAAAGGTCTCTGGCTCTCTGCTCCT 1780 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | || || || ||||| || || || ||||| | | | |||| | ||||| || |||| Sbjct 1781 CCTTCCCAGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCA 1840 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 ||| |||| | | || || | ||||| || ||||| || | || | || |||| Sbjct 1841 GGTACATGGCGAAGGCCCCGGGTCTCTTGTTCCCGCCCTGGTCGACATAACGGGCCGTGT 1900 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 | || || ||||||| ||| || | | || ||||| || ||||| |||| ||| | Sbjct 1901 TGTTGTAGACTCTCAGCATGGGCACGAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGT 1960 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 |||| || | | | || || | | | ||| || || || ||| ||| |||| Sbjct 1961 AGCTCCCTGTTGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGATTTGGAGA 2020 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 | | |||||| | || || || || || ||||| || || || || || ||||| | Sbjct 2021 TGAGGGCGCATTGCTTCAAGGTGTCGTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGA 2080 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | || |||||||| |||| || | | | | || || ||||| || | |||||||| | Sbjct 2081 GCAGGAAACAGCTGGACAGCTGTGGCCTATTGGTCCCTGCATTGAAGAGCGTAGGAGAGG 2140 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || ||||| || || || || || ||||| |||||||| || | ||| || ||| Sbjct 2141 CGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATGTCCG 2200 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 || || || || || | || | ||| | ||||||||| || | ||| | | ||| Sbjct 2201 TTTCGTGGATCCCGACGGAAACCCTCATGAGCATGTGCTGCGGCCGCTCAGCCACTTTGC 2260 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 ||| || ||||||| |||||| |||| ||| || || ||||| ||||||| || | Sbjct 2261 CGTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGA 2320 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 54692 | |||| ||| |||| || | |||||||| || || | | | || | | | Sbjct 2321 AATCTCTGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTGTCGAGAATGATTTTGA 2380 Query 54693 TGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATA 54752 || | || | || ||||| || | |||| || ||||| ||||| | | Sbjct 2381 GCGTCGCCTTGGAGACCATGGGAGAGTGGCGCTGATTTAAGGGGTTGACGTAGTTGTACA 2440 Query 54753 AATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 54812 ||||| |||||| || || || | || || || | ||||| || ||||| || || | Sbjct 2441 GATCCTCCATCACGTCGCTGAACACCTTCTTCGTCTGCTTGTGCAGGTTTGAGACAGCGA 2500 Query 54813 TTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGG 54872 | | ||||| || ||||| || || ||||| | || || |||||| || ||||| | Sbjct 2501 TCCGTGCGGCGAGGATGGCGTAGTCGGGATGCTTAGTTGTGAGAGTGGCGGCGATTTCTG 2560 Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCA 54932 | | || ||||| | || || || || || || || || | || ||||| ||||||| Sbjct 2561 CGGCGAGCGTGTCGAGCTCCACGGTGGTGACGCCGTTGTACAAACCCTGGATCACCTTCA 2620 Query 54933 TAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATAC 54992 | | || | ||||| | | ||| ||| | ||||| || || || || | Sbjct 2621 TGGTGATCTGGGCCGGATCCACAAAGTCACAGTTGAGTCCATAGCACAACTTCTGGATGC 2680 Query 54993 GAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCAT 55034 |||| ||||||||||| ||||||||| |||| | ||||| Sbjct 2681 GAGAGGTGATTTTATCGAACATGACACGCTCCTGGCGTCCAT 2722 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || ||||| || ||||| || || |||| ||||| || ||||| | Sbjct 392 TCCAGCCGTAGAAGTGCATGCTGGTTAGCTTTCCGTAGTTCGGCTCTGCGATGTGGATGT 451 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| || || || || ||||||||||| || | ||| || ||||| || | || |||| Sbjct 452 TCAGCGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGAGTATTGTCT 511 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||||| |||||||| | ||||| | ||| |||||| Sbjct 512 TCTGGGAGATTTCCCAAACGGTTTTATACAGCCGCTTCAGATCAACTGGAA 562 >seq58798 Length=3922 Score = 450 bits (498), Expect = 2e-121 Identities = 1283/1962 (65%), Gaps = 25/1962 (1%) Strand=Plus/Plus Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 ||||| ||||| || |||| | |||||| || | || | || ||||| || || Sbjct 1399 TTCTTCATCTCCTCGCTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGGGGGTTG 1458 Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206 || | || || ||||| || | || || || ||||| || || ||||| || || || Sbjct 1459 ACGATCTGGAACTCTCCGGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGGCTCG 1518 Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 1519 ATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTGGGCATCGGGGCCAGCAGC 1578 Query 53267 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA-A 53324 | || || || | |||| | ||| || || || || || |||| | |||| | Sbjct 1579 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGCTTCC--AGTCCAGCA 1636 Query 53325 GATCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGA 53382 | || | || | | | || || || || || ||| | || Sbjct 1637 GGTCGGTGGG--CGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACAGGAGA 1694 Query 53383 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 53442 ||| | || || ||||| || || || | || || || || |||||||| | || Sbjct 1695 GCCTTCGTACGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCCTCCAGGGC 1754 Query 53443 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 53502 |||| || ||||| || ||||||| | || || || ||||| |||| ||||| Sbjct 1755 GGCGTAGTAGATGGTCTCAAAGATCTGAATGTTCAGCAGCTGAGCTTCGGGGCTTTCAAA 1814 Query 53503 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 53562 || ||| | ||| || || ||||| || || ||||| ||||| || || || || || Sbjct 1815 CGGGTAACGCATGAGGATGAAGGCGTCGGCCAAACCTTGTACACCGATTCCTATCGGCCT 1874 Query 53563 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 53622 || | ||| || || | || ||||| || | ||||| | || || || || || || Sbjct 1875 GTGACGCTTGTTTGACTTCTCCGCTTCAGGCACGGGATAGAAGTTTATTTCAATGATCTT 1934 Query 53623 ATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT---TG 53679 || | ||| |||| || |||||| ||| ||| ||||| ||| ||||| || Sbjct 1935 GTTCAAGTTCTTGACGATGACTTTGGTCACGGCCTCTAGTTTTTTAAAGTCAAAAGTCTG 1994 Query 53680 TCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT- 53738 | | || ||||||| | || || || |||||||| || || |||||||| | Sbjct 1995 CTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGATTGCAGACCGCTACCTCGTC 2054 Query 53739 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797 | || || |||| | || || ||||| || || || |||||||| || | Sbjct 2055 GTGGCT--CGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGGACTTGATGCAGCCCAGG 2112 Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857 || || || || ||||| |||| || || || || || || ||| | |||||||||| | Sbjct 2113 TTCTGGTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCAGAT 2172 Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917 || ||||||| || ||||| || | ||| | ||||||| | | |||| | Sbjct 2173 TCTGTCTGGGACTCGATAATGGCGTGCCACAGCTGCTGAGCCTTCACCACGCGTTTG-AC 2231 Query 53918 CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973 || | ||| ||| | || |||| | || |||||||| || ||||| | Sbjct 2232 CT-TCCCCTCCTTCTCAAAGGAGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTC 2288 Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 ||||| || || || || |||||||||| ||||| ||| || || ||| | Sbjct 2289 GTCCAGCCCGGGGCACTCGCTGGGACACATCAGGGACCAGTCTTGGTTGCTCTCCACCCT 2348 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCT 54092 |||| || || || || ||||| || || ||| || || ||||||| ||| || |||| Sbjct 2349 CCTCATGAACAGGTCGGGGATCCACAGGGC-ATAGAAAAGGTCTCTGGCTCTCTGCTCCT 2407 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | || || || ||||| || || || ||||| | | | |||| | ||||| || |||| Sbjct 2408 CCTTCCCAGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCA 2467 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 ||| |||| | | || || | ||||| || ||||| || | || | || |||| Sbjct 2468 GGTACATGGCGAAGGCCCCGGGTCTCTTGTTCCCGCCCTGGTCGACATAACGGGCCGTGT 2527 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 | || || ||||||| ||| || | | || ||||| || ||||| |||| ||| | Sbjct 2528 TGTTGTAGACTCTCAGCATGGGCACGAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGT 2587 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 |||| || | | | || || | | | ||| || || || ||| ||| |||| Sbjct 2588 AGCTCCCTGTTGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGATTTGGAGA 2647 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 | | |||||| | || || || || || ||||| || || || || || ||||| | Sbjct 2648 TGAGGGCGCATTGCTTCAAGGTGTCGTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGA 2707 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | || |||||||| |||| || | | | | || || ||||| || | |||||||| | Sbjct 2708 GCAGGAAACAGCTGGACAGCTGTGGCCTATTGGTCCCTGCATTGAAGAGCGTAGGAGAGG 2767 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || ||||| || || || || || ||||| |||||||| || | ||| || ||| Sbjct 2768 CGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATGTCCG 2827 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 || || || || || | || | ||| | ||||||||| || | ||| | | ||| Sbjct 2828 TTTCGTGGATCCCGACGGAAACCCTCATGAGCATGTGCTGCGGCCGCTCAGCCACTTTGC 2887 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 ||| || ||||||| |||||| |||| ||| || || ||||| ||||||| || | Sbjct 2888 CGTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGA 2947 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 54692 | |||| ||| |||| || | |||||||| || || | | | || | | | Sbjct 2948 AATCTCTGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTGTCGAGAATGATTTTGA 3007 Query 54693 TGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATA 54752 || | || | || ||||| || | |||| || ||||| ||||| | | Sbjct 3008 GCGTCGCCTTGGAGACCATGGGAGAGTGGCGCTGATTTAAGGGGTTGACGTAGTTGTACA 3067 Query 54753 AATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 54812 ||||| |||||| || || || | || || || | ||||| || ||||| || || | Sbjct 3068 GATCCTCCATCACGTCGCTGAACACCTTCTTCGTCTGCTTGTGCAGGTTTGAGACAGCGA 3127 Query 54813 TTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGG 54872 | | ||||| || ||||| || || ||||| | || || |||||| || ||||| | Sbjct 3128 TCCGTGCGGCGAGGATGGCGTAGTCGGGATGCTTAGTTGTGAGAGTGGCGGCGATTTCTG 3187 Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCA 54932 | | || ||||| | || || || || || || || || | || ||||| ||||||| Sbjct 3188 CGGCGAGCGTGTCGAGCTCCACGGTGGTGACGCCGTTGTACAAACCCTGGATCACCTTCA 3247 Query 54933 TAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATAC 54992 | | || | ||||| | | ||| ||| | ||||| || || || || | Sbjct 3248 TGGTGATCTGGGCCGGATCCACAAAGTCACAGTTGAGTCCATAGCACAACTTCTGGATGC 3307 Query 54993 GAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCAT 55034 |||| ||||||||||| ||||||||| |||| | ||||| Sbjct 3308 GAGAGGTGATTTTATCGAACATGACACGCTCCTGGCGTCCAT 3349 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || ||||| || ||||| || || |||| ||||| || ||||| | Sbjct 1019 TCCAGCCGTAGAAGTGCATGCTGGTTAGCTTTCCGTAGTTCGGCTCTGCGATGTGGATGT 1078 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| || || || || ||||||||||| || | ||| || ||||| || | || |||| Sbjct 1079 TCAGCGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGAGTATTGTCT 1138 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||||| |||||||| | ||||| | ||| |||||| Sbjct 1139 TCTGGGAGATTTCCCAAACGGTTTTATACAGCCGCTTCAGATCAACTGGAA 1189 >seq172677 Length=14965 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| |||| ||| || ||||||||||| ||||| || || || |||| || || || | Sbjct 833 CACTGAATACTTTCTTGGTTTCTTTGTGAAGATTAGAAACTGCAATTCGTGCTGCCAGCA 774 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||| || ||||||| || || ||||| ||| | || || | ||||||||||| Sbjct 773 GTGCATAGTCAGGATGTTTGGTGGTGAGGGTGGCAGCTGTCTCTGCCGCCAGAGTGTCCA 714 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 | || ||||| || |||||| | || | || ||||| |||||||| Sbjct 713 ACTCCACCGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 668 >seq133256 Length=12775 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| |||| ||| || ||||||||||| ||||| || || || |||| || || || | Sbjct 7621 CACTGAATACTTTCTTGGTTTCTTTGTGAAGATTAGAAACTGCAATTCGTGCTGCCAGCA 7562 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||| || ||||||| || || ||||| ||| | || || | ||||||||||| Sbjct 7561 GTGCATAGTCAGGATGTTTGGTGGTGAGGGTGGCAGCTGTCTCTGCCGCCAGAGTGTCCA 7502 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 | || ||||| || |||||| | || | || ||||| |||||||| Sbjct 7501 ACTCCACCGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 7456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592174168550880