Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq147452 167 3e-36 >seq147452 Length=2500 Score = 167 bits (184), Expect = 3e-36 Identities = 145/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| |||| ||||||||| || || | |||||||| || ||||| Sbjct 1965 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAA 1906 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| || |||||||| || ||||||||||||||||| || || ||||| ||| | Sbjct 1905 AGGCACCCCGAGGCCCATGTCGCCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTC 1846 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| |||| | ||||||||| ||||| |||||| ||||||||| || Sbjct 1845 ACACACGTAGAACTGACACAAGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGC 1786 Score = 105 bits (116), Expect = 8e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| |||||||||||||||||||||||||| ||||| |||||||| || ||| Sbjct 725 GTACTCGGCGCCGAAGTGCCTCCACTGGAACCCGTACACGGGTCCCAGGTCTCCTTCCTC 666 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 || | | |||| | | |||||| |||| ||||||||||| ||||| ||||| Sbjct 665 TCTATCAGTGAACCCGAGGTTGTCCAGGAAGCCCCGCGACCCGTTGGCTTCCCAAATCTT 606 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGG 146185 || || || | || ||||| |||| Sbjct 605 CACCCCTTTCTCTGACAGCTCCTTGG 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588538868084240