Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq48580 105 8e-18 >seq48580 Length=9272 Score = 105 bits (116), Expect = 8e-18 Identities = 179/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||| |||||||||||||||||||||| | ||| || || |||| || |||| Sbjct 8162 GAACTTTTCGAAGTTCCAGGCCACGTCGTCCCTGCAGACCGGGCTCCAGATGATTAGCTT 8103 Query 83203 GGGGTCGCTCACGAGCGTGCTCATG--TCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGG 83260 |||||| | | || | || || |||||||| || ||||| | | | ||| Sbjct 8102 GGGGTCAGTGATCAGGG--CTGTTGGCTCGTCGCTGGGGAATGGCAGCTTCCCCCTCAGG 8045 Query 83261 AAGGCGAAGAGCGGATGTGCC-CTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319 || | || || ||||| || ||| | ||||| || || |||||| | |||| ||| Sbjct 8044 AACACAAACAGGGGATGGGCATCTTTC-CCGTTCACATCCACCTTCTCCAGGAGCTGAAA 7986 Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 || |||||||||||||| |||||||||| | |||||| || | ||| || |||| Sbjct 7985 CTTTGGCTCGAAGCCGTTTCCAGGACGGATATACTTCAGAGACATGAGGATTTCCTCATT 7926 Query 83380 CTGGGCGTTTTCCTG 83394 || | ||| ||||| Sbjct 7925 CTTGCAGTTCTCCTG 7911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607210077680240