Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq147452 100 2e-16 >seq147452 Length=2500 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | |||||| || || || ||||||||||| Sbjct 1955 GTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAAAGGCACCCCG 1896 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||| || |||| | || || | |||||| || |||| || |||||||| || Sbjct 1895 AGGCCCATGTCGCCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAG 1836 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||||| ||| | || |||||||||| ||||| Sbjct 1835 AACTGACACAAGGCGTGGCAGGGGGGCAGAGCCAT 1801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345902763986420