Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq162191 127 2e-24 >seq162191 Length=1649 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| ||||||||||| || ||| |||| ||| Sbjct 1584 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCC 1525 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 1524 AGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1465 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||| || | | ||||||||||| ||| || ||||| Sbjct 1464 ATCTTGGCCTTGACGTTCTCAATGCTATCACTAGGCTCCACCTCCAGGGTGATGGTCTTA 1405 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| ||||| |||||||| |||||| Sbjct 1404 CCGGTCAGGGTCTTGACAAAGATCTGCATG 1375 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| ||||||||||| || ||| |||| || Sbjct 1356 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCG 1297 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||| || || |||| ||||| |||||||| || | |||||||||||| Sbjct 1296 AGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1237 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| | ||||||||||| || || ||||| Sbjct 1236 ATCTTGGCCTTGACATTCTCAATGGAGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTC 1177 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| |||||||||||||| ||||| ||| Sbjct 1176 CCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394071247988626