Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq195903 87.8 2e-12 >seq195903 Length=4854 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||| || ||||| || ||||| || | || | || ||||| ||||||| || | Sbjct 1616 CCTCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAATCCTCTCTTCT 1557 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | |||| | || ||||||||||| || || ||||| || ||||| ||||| ||||| | Sbjct 1556 TGAGCCAATAGATAGCAGCGAATGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCAAAAG 1497 Query 14346 C 14346 | Sbjct 1496 C 1496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481088450604080