Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq162191 132 1e-25 seq21003 87.8 4e-12 >seq162191 Length=1649 Score = 132 bits (146), Expect = 1e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||||| || || | ||||| || ||||| |||||| Sbjct 1344 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGTTGCTTTCCA 1285 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || || || || ||||| ||||| || || Sbjct 1284 GCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1225 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||||| || || ||||| | || || ||||| || || || || Sbjct 1224 ACATTCTCAATGGAGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTCCCGGTCAGGGTC 1165 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| |||||||||||| Sbjct 1164 TTCACAAAGATCTGCATTTTG 1144 >seq21003 Length=4390 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 78486 GAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCA 78545 |||| | |||||||||| |||||||| || || || || || || || | || |||| Sbjct 1251 GAGCTCTGTGGTGGTATTTCATCTCTAAGGGCATCGAGTATCTGGACACGGTGTTTTTCA 1192 Query 78546 TCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGT 78605 |||| | || || || || || ||| ||| | ||||| || || || | || |||| Sbjct 1191 TCCTGAGGAAAAAGTTCAACCAGGTTACTTTCTTGCATGTCTACCACCACTGCACCATGT 1132 Query 78606 TTACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648 | ||| || | ||||| || || || ||| | ||||||||||| Sbjct 1131 TCACTCTGTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACA 1089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148322458604248