Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq147452 118 7e-22 >seq147452 Length=2500 Score = 118 bits (130), Expect = 7e-22 Identities = 133/177 (75%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| |||||||| || ||||| | ||||||||||||||||||||| ||||| ||||| Sbjct 734 CATGTTTGTGTACTCGGCGCCGAAGTGCCTCCACTGGAACCCGTACACGGGTCCCAGGTC 675 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 ||| || || || | || || || |||| ||| | | || || ||||| || Sbjct 674 TCCTTCCTCTCTATCAGTGAACCCGAGGTTGTCCAGGAAGCCCCGCGACCCGTTGGCTTC 615 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 25949 ||| ||||| ||||| ||||| || ||||| |||| ||||| || || |||| ||| Sbjct 614 CCAAATCTTCACCCCTTTCTCTGACAGCTCCTTGGCATTTGTTGATCC-CTGAGGAA 559 Score = 118 bits (130), Expect = 7e-22 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| || || || ||||||||||| || || || ||||||| |||||| Sbjct 1946 GCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAAAGGCACCCCGAGGCCCATG 1887 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || || || | |||||| ||||||||||| ||||| |||| | |||||| |||||||| Sbjct 1886 TCGCCT-GAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAGAACTGACA 1828 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 || || || ||| || || ||||| || ||| || |||| Sbjct 1827 CAAGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCT 1788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339273253597938