Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq162191 113 4e-20 >seq162191 Length=1649 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 ||| || ||||| || ||||| || || | ||||| || || ||||| | || ||||| Sbjct 1141 TGTCAAAATGCAGATCTTTGTGAAGACCCTGACCGGGAAGACCATCACTTTGGAGGTGGA 1200 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 ||| ||| || | || || |||| || || || ||||||||||| || || || Sbjct 1201 GCCCAGCGACTCCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCC 1260 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 ||| || || ||||| || ||||| || || || | ||||| ||||||| |||| || Sbjct 1261 CGACCAGCAGCGTCTGATCTTTGCTGGAAAGCAACTCGAGGACGGCCGCACCCTCTCTGA 1320 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 |||||||| || || || |||||| Sbjct 1321 CTACAACATCCAGAAGGAGTCCACC 1345 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | |||||||| || |||| || || ||||| | | Sbjct 1376 ATGCAGATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCTAGT 1435 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||| | | || | |||| || || || ||||||||||| || || || || || Sbjct 1436 GATAGCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 1495 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||||||| | || || ||||||| |||| || |||||| Sbjct 1496 CAGCGTCTGATCTTTGCTGGCAAACAGCTGGAAGACGGCCGCACCCTCTCTGACTACAAC 1555 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1556 ATCCAGAAGGAGTCCACC 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418661401109890