Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq170438 98.7 2e-15 seq208053 93.3 9e-14 seq179096 91.5 3e-13 seq86484 91.5 3e-13 seq179032 89.7 1e-12 seq131854 89.7 1e-12 seq91495 89.7 1e-12 seq82107 89.7 1e-12 seq73270 89.7 1e-12 seq113756 87.8 4e-12 >seq170438 Length=3325 Score = 98.7 bits (108), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 142487 AACCGGGTGGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAG 142546 ||||| |||||| | |||||| |||||||||||||||||| ||||||||||||| Sbjct 1884 AACCGCATGGTGACAGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCA 1943 Query 142547 TGGTCGTGGGTTCGAGCCCCACATCGGGC 142575 ||||||||||||||||||||| | |||| Sbjct 1944 GGGTCGTGGGTTCGAGCCCCACGTTGGGC 1972 >seq208053 Length=1013 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 287 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 346 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 347 GCCCCACGTTGGGC 360 >seq179096 Length=2756 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 666 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 607 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 606 AGCCCCACGTTGGGC 592 >seq86484 Length=2874 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 370 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 311 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 310 AGCCCCACGTTGGGC 296 >seq179032 Length=1064 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 562 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 621 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 622 CCCACGTTGGGC 633 >seq131854 Length=3059 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 571 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 512 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 511 CCCACGTTGGGC 500 >seq91495 Length=7585 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 6772 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6713 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 6712 CCCACGTTGGGC 6701 >seq82107 Length=3059 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2489 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2548 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2549 CCCACGTTGGGC 2560 >seq73270 Length=2420 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 600 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 659 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 660 CCCACGTTGGGC 671 >seq113756 Length=2279 Score = 87.8 bits (96), Expect = 4e-12 Identities = 67/77 (87%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106 |||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||| Sbjct 457 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 515 Query 142107 TCGACCCCCGCCAGAGA 142123 |||| |||| |||||| Sbjct 516 TCGAGTCCCGGCAGAGA 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025090951333546