Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25]
208,506 sequences; 699,326,415 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq162191 134 3e-26
>seq162191
Length=1649
Score = 134 bits (148), Expect = 3e-26
Identities = 172/236 (73%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||| | || || || || | ||| || || ||||| || ||||
Sbjct 1378 CATG-CCTCCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 1320
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | ||| ||||| ||||| || | ||| ||||| || |||||||||||||| ||
Sbjct 1319 CAGAGAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCGG 1260
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| || || || || || || || || ||||| | |
Sbjct 1259 GGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGAGTCGCTGGGCT 1200
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
| || || | ||||| |||||||||||||| ||||| || || ||||||||| ||
Sbjct 1199 CCACCTCCAAAGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 1144
Score = 132 bits (146), Expect = 1e-25
Identities = 172/235 (73%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||| | || || || || | ||| || || ||||| || ||||
Sbjct 1606 CATG-CCTCCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 1548
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | ||| ||||| |||||||| | ||||| || || |||||||||||||| || |
Sbjct 1547 CAGAGAGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTG---GT 1491
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|| ||||| || || || |||||||| || || || ||||| || || ||| || |
Sbjct 1490 CTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCACTAG 1431
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| |||||||| |||||||| || ||||||||
Sbjct 1430 GCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATCTGCAT 1376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176502973177068
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |