Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq162191 104 2e-17 >seq162191 Length=1649 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || |||||| |||| || || ||||| || Sbjct 1344 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGTTGCTTTCCA 1285 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || |||||||||||||| || || || || || || || || || ||| Sbjct 1284 GCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1225 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | | || | || ||||| || | ||| | |||||| ||||||| || Sbjct 1224 ACATTCTCAATGGAGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTCCCGGTCAGGGTC 1165 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || || || |||||||| Sbjct 1164 TTCACAAAGATCTGCATTTT 1145 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || |||||| ||||||| ||||| ||||| Sbjct 1572 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCCAGCTGTTTGCCA 1513 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| || || || || || || || || || || ||| Sbjct 1512 GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1453 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | |||||| | ||||| || | || | |||||| ||||||| || Sbjct 1452 ACGTTCTCAATGCTATCACTAGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 1393 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 1392 TTGACAAAGATCTGCAT 1376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498342563266640