Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq162191 150 2e-31 >seq162191 Length=1649 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||||| || | || |||||| ||||| |||||||| | Sbjct 1376 TGCCTCCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 1317 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| |||| ||||| ||||| || || || |||| ||||||||||||| | Sbjct 1316 AGAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCGGGGG 1257 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| || | | | |||||| | |||| Sbjct 1256 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGAGTCGCTGGGCTCCA 1197 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||| |||||||| || || ||||| || || |||||||| ||||||||| Sbjct 1196 CCTCCAAAGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 1144 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||||| || | || |||||| ||||| |||||||| | Sbjct 1604 TGCCTCCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 1545 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| |||| || ||||| ||||| || || |||| ||||||||||| | | Sbjct 1544 AGAGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGG 1485 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| || | | | || || | |||| Sbjct 1484 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCACTAGGCTCCA 1425 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| || || ||||| || || |||||||| ||||| Sbjct 1424 CCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATCTGCAT 1376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563765205027120