Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq153745 125 6e-24 seq125345 125 6e-24 >seq153745 Length=6471 Score = 125 bits (138), Expect = 6e-24 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || |||||| |||||| Sbjct 2681 AGATCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTTTGATGAACCCATCA 2622 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| ||||| | || ||||| || ||||||||| | || ||||||||| Sbjct 2621 AGCATGTCCTGCAACTTGTTCGCCTCATGGGATCCATTGACGATGTAACGGTCGTTTTTG 2562 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| ||||||| Sbjct 2561 CCATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGGGT 2510 >seq125345 Length=5240 Score = 125 bits (138), Expect = 6e-24 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || |||||| |||||| Sbjct 195 AGATCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTTTGATGAACCCATCA 136 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| ||||| | || ||||| || ||||||||| | || ||||||||| Sbjct 135 AGCATGTCCTGCAACTTGTTCGCCTCATGGGATCCATTGACGATGTAACGGTCGTTTTTG 76 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| ||||||| Sbjct 75 CCATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGGGT 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411792500601458