Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq21003 87.8 3e-12 >seq21003 Length=4390 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || ||||| || || || || | || || |||||||||| Sbjct 1251 GAGCTCTGTGGTGGTATTTCATCTCTAAGGGCATCGAGTATCTGGACACGGTGTTTTTCA 1192 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTC-TACACGTATATCATCATTTTACTATG 58495 | || ||||||||||| || || |||| ||||| | || || || || || | || ||| Sbjct 1191 TCCTGAGGAAAAAGTTCAACCAGGTTA-CTTTCTTGCATGTCTACCACCACTGCACCATG 1133 Query 58496 TTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 || ||| | | ||| | || || || ||| | |||||||| ||| Sbjct 1132 TTCACTCTGTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACAG 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901056616804160