Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq135289 116 5e-21 seq71836 116 5e-21 seq62555 116 5e-21 >seq135289 Length=1586 Score = 116 bits (128), Expect = 5e-21 Identities = 247/369 (67%), Gaps = 0/369 (0%) Strand=Plus/Plus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754 || ||||| |||||||| || ||||||||| | ||||| |||||||| ||||| || || Sbjct 606 TTCCCCATTGCCTACTCCATGGTGATCCACGAGAAGATAGAGATGTTTGAGCGACTTCTA 665 Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGAC 13814 | || | || | || |||||| ||||||| || || |||||| || || | Sbjct 666 CGAGCTGTTTATACTCCTCAGAACATCTACTGTGTGCATGTGGACCAGAAAGCCCCTAAA 725 Query 13815 GAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCAC 13874 || ||| | || || ||| || ||||| ||||||||| | ||| Sbjct 726 GATTTCCACAAGGCTGTGGCGGTAATTATTTCCTGCTTTCCTAACGTGTTTGTAGCCAGT 785 Query 13875 CGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATG 13934 | | | ||||| |||| ||| ||| || |||||||| || | | ||||||| Sbjct 786 AGATTAGAAAGTGTGGTATACGCCTCATGGTCCCGAGTGCAGGCAGATTTGAACTGCATG 845 Query 13935 TCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGAC 13994 || ||| ||| | ||| |||||||||||||||||||| || ||| ||| Sbjct 846 AAAGATCTGCTGAGCTCGCAGGTCCAGTGGAGGTACCTGCTCAACACCTGTGGGTCAGAC 905 Query 13995 TTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAAC 14054 ||||| |||| ||||| | || || | |||| ||||||||||| | || | |||| Sbjct 906 TTCCCCATCAAAACCAATGTTGAAATGATTCGGGTACTGAAGGCCCTCAGAGGGAGGAAC 965 Query 14055 GCCCTGGAG 14063 | ||||| Sbjct 966 AGCATGGAG 974 >seq71836 Length=1774 Score = 116 bits (128), Expect = 5e-21 Identities = 247/369 (67%), Gaps = 0/369 (0%) Strand=Plus/Plus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754 || ||||| |||||||| || ||||||||| | ||||| |||||||| ||||| || || Sbjct 794 TTCCCCATTGCCTACTCCATGGTGATCCACGAGAAGATAGAGATGTTTGAGCGACTTCTA 853 Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGAC 13814 | || | || | || |||||| ||||||| || || |||||| || || | Sbjct 854 CGAGCTGTTTATACTCCTCAGAACATCTACTGTGTGCATGTGGACCAGAAAGCCCCTAAA 913 Query 13815 GAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCAC 13874 || ||| | || || ||| || ||||| ||||||||| | ||| Sbjct 914 GATTTCCACAAGGCTGTGGCGGTAATTATTTCCTGCTTTCCTAACGTGTTTGTAGCCAGT 973 Query 13875 CGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATG 13934 | | | ||||| |||| ||| ||| || |||||||| || | | ||||||| Sbjct 974 AGATTAGAAAGTGTGGTATACGCCTCATGGTCCCGAGTGCAGGCAGATTTGAACTGCATG 1033 Query 13935 TCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGAC 13994 || ||| ||| | ||| |||||||||||||||||||| || ||| ||| Sbjct 1034 AAAGATCTGCTGAGCTCGCAGGTCCAGTGGAGGTACCTGCTCAACACCTGTGGGTCAGAC 1093 Query 13995 TTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAAC 14054 ||||| |||| ||||| | || || | |||| ||||||||||| | || | |||| Sbjct 1094 TTCCCCATCAAAACCAATGTTGAAATGATTCGGGTACTGAAGGCCCTCAGAGGGAGGAAC 1153 Query 14055 GCCCTGGAG 14063 | ||||| Sbjct 1154 AGCATGGAG 1162 >seq62555 Length=2559 Score = 116 bits (128), Expect = 5e-21 Identities = 247/369 (67%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754 || ||||| |||||||| || ||||||||| | ||||| |||||||| ||||| || || Sbjct 2401 TTCCCCATTGCCTACTCCATGGTGATCCACGAGAAGATAGAGATGTTTGAGCGACTTCTA 2342 Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGAC 13814 | || | || | || |||||| ||||||| || || |||||| || || | Sbjct 2341 CGAGCTGTTTATACTCCTCAGAACATCTACTGTGTGCATGTGGACCAGAAAGCCCCTAAA 2282 Query 13815 GAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCAC 13874 || ||| | || || ||| || ||||| ||||||||| | ||| Sbjct 2281 GATTTCCACAAGGCTGTGGCGGTAATTATTTCCTGCTTTCCTAACGTGTTTGTAGCCAGT 2222 Query 13875 CGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATG 13934 | | | ||||| |||| ||| ||| || |||||||| || | | ||||||| Sbjct 2221 AGATTAGAAAGTGTGGTATACGCCTCATGGTCCCGAGTGCAGGCAGATTTGAACTGCATG 2162 Query 13935 TCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGAC 13994 || ||| ||| | ||| |||||||||||||||||||| || ||| ||| Sbjct 2161 AAAGATCTGCTGAGCTCGCAGGTCCAGTGGAGGTACCTGCTCAACACCTGTGGGTCAGAC 2102 Query 13995 TTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAAC 14054 ||||| |||| ||||| | || || | |||| ||||||||||| | || | |||| Sbjct 2101 TTCCCCATCAAAACCAATGTTGAAATGATTCGGGTACTGAAGGCCCTCAGAGGGAGGAAC 2042 Query 14055 GCCCTGGAG 14063 | ||||| Sbjct 2041 AGCATGGAG 2033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657022311554560