Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq147452 105 6e-18 >seq147452 Length=2500 Score = 105 bits (116), Expect = 6e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || || ||||| || ||||| |||||| || | || || |||||||| | Sbjct 1789 GACCTGCCCCTCATGGCTCTGCCCCCCTGCCACGCCTTGTGTCAGTTCTACGTGTGTGAC 1848 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || |||||||| || ||||| || || || || || |||||||| | |||||||| ||| Sbjct 1849 GGCGAGCTGTCGTGTCAGCTGTACCAGCGCTCAGGCGACATGGGCCTCGGGGTGCCTTTC 1908 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 || || || || || || || || || ||||||||||| || Sbjct 1909 AATATCGCCAGCTATGCACTTCTTACCTACATGATCGCACA 1949 Score = 105 bits (116), Expect = 6e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| || || || || || || || || ||||| |||||||| | ||| Sbjct 1949 TGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAAAGGCACCCCGAGGCCC 1890 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| || || || || || ||||| || |||||||| || | |||||||| || Sbjct 1889 ATGTCGCCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAGAACTGA 1830 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || | || |||||| ||||| || ||||| || || || || Sbjct 1829 CACAAGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTC 1789 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 ||||||||||| ||||| || ||||||| || | ||| |||||||| | |||||| | Sbjct 600 GGGGTGAAGATTTGGGAAGCCAACGGGTCGCGGGGCTTCCTGGACAACCTCGGGTTCACT 659 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 | | ||||| || ||| |||| || || ||||||||||||||||| ||||| || || Sbjct 660 GATAGAGAGGAAGGAGACCTGGGACCCGTGTACGGGTTCCAGTGGAGGCACTTCGGCGCC 719 Query 34442 GAGTA 34446 ||||| Sbjct 720 GAGTA 724 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || || ||||| ||||||||||||||||| || || |||| ||| || ||||| Sbjct 724 TACTCGGCGCCGAAGTGCCTCCACTGGAACCCGTACACGGGTCCCAGGTCTCCTTCCTCT 665 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | | |||||| | |||||||| ||| | || ||||||| || ||||| |||||| Sbjct 664 CTATCAGTGAACCCGAGGTTGTCCAGGAAGCCCCGCGACCCGTTGGCTTCCCAAATCTTC 605 Query 7019 ACCCC 7023 ||||| Sbjct 604 ACCCC 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447094082500320