Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq162191 93.3 1e-13 >seq162191 Length=1649 Score = 93.3 bits (102), Expect = 1e-13 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| || | | || | Sbjct 1366 GAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCG 1307 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || ||||| || || ||||| || | ||||||||| | | ||| || Sbjct 1306 GCCGTCCTCGAGTTGCTTT--CCAGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCC 1249 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || |||||| |||| | | ||| ||| || || | | Sbjct 1248 TCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGAGTCGCTGGGCTCCACCTCCAAA 1189 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || |||||||| |||| ||||||||| Sbjct 1188 GTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 1145 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| || | | || | Sbjct 1594 GAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCG 1535 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || ||| || || ||||| || | ||||||||| | | ||| || || Sbjct 1534 GCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTC 1475 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| |||| | ||| || | ||| || || || || Sbjct 1474 CTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCACTAGGCTCCACCTCCAGGGT 1415 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||| || |||| |||||| Sbjct 1414 GATGGTCTTACCGGTCAGGGTCTTGACAAAGATCTGCAT 1376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150738387203526