Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq162191 149 1e-30 seq100462 93.3 9e-14 seq175001 91.5 3e-13 >seq162191 Length=1649 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||| || || |||||||||||||||| Sbjct 1374 CCTCCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1315 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| ||||| || || |||||||||| ||| || ||||| || Sbjct 1314 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGG 1255 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || || | || || | ||| | || || Sbjct 1254 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGAGTCGCTGGGCTCCACC 1195 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | |||||| ||||| || |||| ||||| || || ||||||||||| Sbjct 1194 TCCAAAGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 1145 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||| || || |||||||||||||||| Sbjct 1602 CCTCCACGGAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1543 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || ||||| || |||||||||| ||| || ||||| || Sbjct 1542 AGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGG 1483 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | || || | || || || || Sbjct 1482 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCACTAGGCTCCACC 1423 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| |||||||| |||| ||||| || || |||||||| Sbjct 1422 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATCTGCAT 1376 >seq100462 Length=2944 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 2321 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 2263 >seq175001 Length=17688 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054 ||| |||||||| ||||||||||| || || | ||||||||||| | || || || Sbjct 8052 ACCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTGGGCTCAACCTC 7993 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||| ||||| |||||||| ||||| ||||| |||||||| || Sbjct 7992 AAGGGTGATGGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCATGTT 7945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1043942853890924