Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq162191 129 4e-25 >seq162191 Length=1649 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 1356 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCG 1297 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||||| ||||||||| || | || | || ||||| ||| Sbjct 1296 AGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1237 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||| |||| || |||||||||| || || ||||| Sbjct 1236 ATCTTGGCCTTGACATTCTCAATGGAGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTC 1177 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| ||||| ||||| Sbjct 1176 CCGGTCAGGGTCTTCACAAAGATCTGCAT 1148 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| || | ||| ||| |||| ||| Sbjct 1584 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCC 1525 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || |||||||||| ||||||||| |||| || | || ||||| ||| Sbjct 1524 AGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1465 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | | |||| | ||| | || | |||||||||| || || ||||| Sbjct 1464 ATCTT-GGCCTTGACGTTCTCAATGCTATCACTAGGCTCCACCTCCAGGGTGATGGTCTT 1406 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||||||| || ||||| |||||| Sbjct 1405 ACCGGTCAGGGTCTTGACAAAGATCTGCATG 1375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359075604320202