Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq162191 113 1e-19 >seq162191 Length=1649 Score = 113 bits (124), Expect = 1e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || || || || || || || || || |||||||| |||||||| || || Sbjct 1379 CAGATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCTAGTG 1436 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | | ||| ||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 1437 ATAGCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGC 1496 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||| || || |||||||| ||||| || | || || | || || ||| Sbjct 1497 AGCGTCTGATCTTTGCTGGCAAACAGCTGGAAGACGGCCGCACCCTCTCTGACTACAACA 1556 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 1557 TCCAGAAGGAGTCCACCCTCCACCTGGT 1584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200515452412164