Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4474 89.7 5e-13 >seq4474 Length=14602 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 16664 ACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGA 16723 ||||||||||||||||| |||| ||| || ||||| || ||||| || || ||||| | Sbjct 6103 ACACCCATTCTTTGGTACTCGCCAACTCGCTTTTCAAAGAAGTTGGTCTTCCCCTCCAAG 6044 Query 16724 GATATATTCTCCATGAAATCAAAAGGATT 16752 || || ||||||||||| ||||| ||||| Sbjct 6043 GAAATGTTCTCCATGAAGTCAAAGGGATT 6015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517476151849800