Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq54 89.7 4e-13 >seq54 Length=1125963 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||||||||| || || | |||||||||||||| ||||| |||||||| |||||||| | Sbjct 982179 CTTTATATTCAGCACCATAGTGCCTCCACTGAAAACCATATACAGGTCCTAGATCTCCCT 982120 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || | ||| ||| ||| || || | || | || |||||||||||||||| Sbjct 982119 CCTCCCGCTCAGTAAATCCACTCTTGTCCAGGAAGTCCCGTGACCCATTCGCATCCCAAA 982060 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | || || |||| ||||||||| Sbjct 982059 TCTTTACACCTTTCTCTGAAAGCTCTTTG 982031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361203936489485