Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq54 89.7 4e-13
>seq54
Length=1125963
Score = 89.7 bits (98), Expect = 4e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||||||||| || || | |||||||||||||| ||||| |||||||| |||||||| |
Sbjct 982179 CTTTATATTCAGCACCATAGTGCCTCCACTGAAAACCATATACAGGTCCTAGATCTCCCT 982120
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| || | ||| ||| ||| || || | || | || ||||||||||||||||
Sbjct 982119 CCTCCCGCTCAGTAAATCCACTCTTGTCCAGGAAGTCCCGTGACCCATTCGCATCCCAAA 982060
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| | || || |||| |||||||||
Sbjct 982059 TCTTTACACCTTTCTCTGAAAGCTCTTTG 982031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361203936489485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |