Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq54 118 1e-21 >seq54 Length=1125963 Score = 118 bits (130), Expect = 1e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| || | |||||| ||||| |||| ||||| || || ||||| Sbjct 982969 CTTGAGTCCTGTGATGTGTGCTATCATGTATGTCAGAAGGGCATAGCTTGCGATATTGAA 982910 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 || || ||||| || || ||||||||||||||||| | ||||| || || || || | Sbjct 982909 TGGAACACCCAGACCGATATCCCCCGAGCGCTGGTATAATTGGCAAGACAGTTCACCCTC 982850 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 | || |||||||||||||| |||||||| || || ||||| Sbjct 982849 AGAGACATAGAACTGGCACAGAGCATGGCAGGGTGGAAGAGCCAT 982805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589997619069400