Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq54 100 2e-16 >seq54 Length=1125963 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| ||||| | |||||| | || || || ||| || ||||| || || || || | Sbjct 982792 AGATTTGCCTCTGATGGCTCTTCCACCCTGCCATGCTCTGTGCCAGTTCTATGTCTCTGA 982851 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 |||| |||| || ||| | || || || || | ||||| || ||||||||||| || Sbjct 982852 GGGTGAACTGTCTTGCCAATTATACCAGCGCTCGGGGGATATCGGTCTGGGTGTTCCATT 982911 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 |||||| ||||| ||||| || || || || ||||| ||||| | |||| Sbjct 982912 CAATATCGCAAGCTATGCCCTTCTGACATACATGATAGCACACATCACAG 982961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399131773634575