Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq54 100 2e-16
>seq54
Length=1125963
Score = 100 bits (110), Expect = 2e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447
|||| ||||| | |||||| | || || || ||| || ||||| || || || || |
Sbjct 982792 AGATTTGCCTCTGATGGCTCTTCCACCCTGCCATGCTCTGTGCCAGTTCTATGTCTCTGA 982851
Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507
|||| |||| || ||| | || || || || | ||||| || ||||||||||| ||
Sbjct 982852 GGGTGAACTGTCTTGCCAATTATACCAGCGCTCGGGGGATATCGGTCTGGGTGTTCCATT 982911
Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
|||||| ||||| ||||| || || || || ||||| ||||| | ||||
Sbjct 982912 CAATATCGCAAGCTATGCCCTTCTGACATACATGATAGCACACATCACAG 982961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399131773634575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |