Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10547 111 1e-19
>seq10547
Length=7526941
Score = 111 bits (122), Expect = 1e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234
|||||||| || || ||||| ||||| |||| || || ||||| | |||| ||| ||
Sbjct 2162725 TCATCTCTGCTGATGAGCTCATTTGAGTATGTAAGTCCAGGCATCAAACCTCTTTTCTTC 2162784
Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294
| ||| | || ||||||||||| || || ||||| || ||||||||||||||||| |||
Sbjct 2162785 AGCCAGTAGATGGCAGCAAACGACCCAGAGAAAAAGATGCCTTCAACTGCTGCAAATGCT 2162844
Query 13295 ATCAACCTTTCACC 13308
||||| || || ||
Sbjct 2162845 ATCAATCTCTCCCC 2162858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430926013360470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |