Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq183 89.7 4e-13
>seq183
Length=784777
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | ||||| || | || ||| |||| || ||| | | |
Sbjct 332084 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCAAGC 332025
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| ||| | || || ||||| |||||||||||||| || || |||||
Sbjct 332024 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 331965
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| |||| | | |||||| || || ||||||| | | | | ||| || |||
Sbjct 331964 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 331905
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || |||||||| ||
Sbjct 331904 ATCCAGAAAGAATCCAC 331888
Score = 89.7 bits (98), Expect = 4e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048
|||||||| | ||||| || || | ||||| || | || ||| | || || ||| | |
Sbjct 332314 AAATGCAAATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCAA 332255
Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108
||||| || ||| | |||||| ||||| |||||||||||||| || || || |
Sbjct 332254 GTGACACAATTGAGAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACC 332195
Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147
| ||||| |||| | || |||||||| || |||||||
Sbjct 332194 AGCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATG 332156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429879750263925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |