Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq10607 107 2e-18
seq4474 86.0 7e-12
>seq10607
Length=2140885
Score = 107 bits (118), Expect = 2e-18
Identities = 86/104 (83%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
|||| |||| | ||||||||||||| | ||||||| ||||||| |||||||| |||||
Sbjct 829745 TAGAAATTGCTAGTGTATGGCTCAATGGACTCATTATTACCCAGAATTTGGGCTGTGGAA 829804
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTT 114045
|| |||||||| ||||| | ||||| |||||||||| ||| ||
Sbjct 829805 GCGGTGGGCATCGGTGCAAGCAGAAGACTGTTACGGATACCATT 829848
Score = 93.3 bits (102), Expect = 5e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558
||||||||| || ||||| | ||| || ||||||||||| | |||||||||||
Sbjct 830770 CTCATCCTTGCTTGTATACTCCACAATCTCTGTACACAAATTGCTGCATTTAATGGTGCC 830829
Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618
| ||||| || || ||| | || || ||||| |||||||||||||| || || ||
Sbjct 830830 GAGGTTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAAAGCATGTAGGGAGTGCC 830889
Query 114619 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 114654
||||| || || |||| | |||||| | ||| ||
Sbjct 830890 AGTCTCAGTCTGAGACTCAATAATAGCATACCACAC 830925
>seq4474
Length=14602
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
|||| || | | |||||| ||||| |||||| || || |||||||| || | ||| |
Sbjct 5246 CCTCATCTCTGCTGATGAGCTCATTGGAGAAGGTAAGGCCAGGCATGAGTCCTCTCTTTT 5187
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175
| | |||||| || ||| ||| ||||| |||||||||||||| ||||||
Sbjct 5186 TGAGCCAGAAGATGGCAGCAAAAGAACCTGAGAAGAAGATTCCTTCCACA 5137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597273442613800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |