Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq10607 87.8 3e-12 >seq10607 Length=2140885 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | ||||||| || || |||| |||||| || || |||| Sbjct 828722 CCTGCTTCCAGCCATAAAAGTGCATGCTAGTAAGCTTGCCATAGTTGGGCTCTGCAATGT 828781 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | || || || ||||| || ||||||||||||| | | | || || ||||| |||| | Sbjct 828782 GGATATTGAGGGACTGACTCTGGTCGATGAAAGCCCCTCTGTCAGCAGCCATCTTGAGGA 828841 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||||| ||||||||||| || ||||| Sbjct 828842 CCACCTTCTGAGAAATCTCCCATACAGTCTT 828872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795048500111600