Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq10603 89.7 6e-13 >seq10603 Length=2343070 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 153904 TAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCA 153963 |||| || ||||||||||||||||| ||| || |||||||||| ||||| |||||||||| Sbjct 807787 TAGCTCTCCAGACTAGAGAGCAGCACATCCGGCGAGACAAAGCCACCAGCAACATCTGCA 807846 Query 153964 CAGCTCAGG 153972 | ||||||| Sbjct 807847 CTGCTCAGG 807855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579135076882400