Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq10547 96.9 4e-15 >seq10547 Length=7526941 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | ||||| || | || | ||| ||||| ||||||||||| || Sbjct 2162725 TCATCTCTGCTGATGAGCTCATTTGAGTATGTAAGTCCAGGCATCAAACCTCTTTTCTTC 2162784 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| | || || ||||| || ||||| || || || ||||||||||||||||||||| Sbjct 2162785 AGCCAGTAGATGGCAGCAAACGACCCAGAGAAAAAGATGCCTTCAACTGCTGCAAATGCT 2162844 Query 37320 A 37320 | Sbjct 2162845 A 2162845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592237318489400