Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq10607 87.8 2e-12
seq4474 87.8 2e-12
>seq10607
Length=2140885
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 76483 GAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAAT 76542
||| ||| | |||||||||||| || | ||||| ||||| || || ||||| || |||||
Sbjct 829849 GAATGGTATCCGTAACAGTCTTCTGCTTGCACCGATGCCCACCGCTTCCACAGCCCAAAT 829790
Query 76543 CTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588
||||||||||||| | | |||| |||||||| | || |||||
Sbjct 829789 TCTGGGTAATAATGAGTCCATTGAGCCATACACTAGCAATTTCTAC 829744
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934
|| ||| | |||||| | | || ||||| |||||||| || || || |||||||||||
Sbjct 830925 GTGTGGTATGCTATTATTGAGTCTCAGACTGAGACTGGCACTCCCTACATGCTTTACAAA 830866
Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994
||||| || || | |||||| ||||| |||| | || || || || || ||| |
Sbjct 830865 GATGCCTGCAATAGGAAGAGCAACCAGCAGAACCTCGGCACCATTAAATGCAGCAATTTG 830806
Query 75995 TGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030
|| || || ||| | ||||| ||| |||||||||
Sbjct 830805 TGTACAGAGATTGTGGAGTATACAAGCAAGGATGAG 830770
>seq4474
Length=14602
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500
||||||| |||||||| ||||| |||||| | | || |||||||||||||||||||| |
Sbjct 6013 AGAATCCCTTTGACTTCATGGAGAACATTTCCTTGGAGGGGAAGACCAACTTCTTTGAAA 6072
Query 65501 AGCGAGTTGGGGACTA 65516
|||||||||| || ||
Sbjct 6073 AGCGAGTTGGCGAGTA 6088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596489547816800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |