Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq167 363 2e-95
seq10555 187 3e-42
seq183 170 3e-37
seq592 152 7e-32
seq228 145 1e-29
seq10722 127 3e-24
seq10671 96.9 5e-15
seq10574 96.9 5e-15
>seq167
Length=797236
Score = 363 bits (402), Expect = 2e-95
Identities = 1042/1585 (66%), Gaps = 23/1585 (1%)
Strand=Plus/Minus
Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361
||||| || || | |||||||| ||||| ||||| ||||| | || ||| ||
Sbjct 619294 ATTGGAATTGACCTTGGAACTACCTACTCCTGTGTGGGTGTTTTCCAGCATGGCAAAGTT 619235
Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421
|| || || | || || ||||||||| | |||||||| || || || ||||||||
Sbjct 619234 GAAATCATTGCCAACGATCAAGGAAACAGGACAACTCCCAGCTATGTGGCGTTTACAGAC 619175
Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481
| ||| | ||| | |||||||| || ||||| ||| || ||||| || | ||| ||
Sbjct 619174 ACTGAGAGGCTCATCGGAGATGCTGCCAAAAACCAGGTCGCCATGAATCCCAACAACACC 619115
Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541
| ||||| || |||||||| ||||| | | |||| || || || ||
Sbjct 619114 ATTTTTGATGCAAAGCGTCTGATTGGCAGAAGGTTTGATGACGCTGTGGTTCAGTCAGAC 619055
Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601
|| || |||| | | | |||| | | ||| | | ||||| | | | ||
Sbjct 619054 ATGAAACTCTGGCCCTTTAAAGTGAT---CAGTGATGGAGGCAAGCCGAAAGTGGAGGTG 618998
Query 195602 GAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGAT 195660
|| | | || ||| ||| || ||| | || || || || ||||||||||| | |
Sbjct 618997 GAGTACAAGGGGGAGGTGAAGACCTTTTAC-CCTGAGGAGATCTCGTCTATGGTCCTTGT 618939
Query 195661 TAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720
|| |||| ||||| | | ||| | | |||| | | || | |||| || | ||
Sbjct 618938 GAAAATGAGGGAGATTTCTGAAGCCTATTTGGGCCAGAGAGTCACCAATGCCGTAATCAC 618879
Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780
|| || |||||||||| || || || | |||||||| || || |||| | |||||
Sbjct 618878 AGTCCCGGCTTACTTCAACGACTCCCAGAGGCAGGCGACCAAAGATGCTGGAGTGATTGC 618819
Query 195781 GGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839
|| || || ||| || ||||| |||||||| || ||||| || || ||||| || ||||
Sbjct 618818 TGGACTGAA-TGTGCTGAGAATCATCAATGAGCCCACAGCAGCCGCCATTGCCTACGGTC 618760
Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
|||||||| |||| | || | ||||| |||||||||| | || || || || |
Sbjct 618759 TGGACAAGGGCAAGAGAGGCGAGAGGAATGTCCTGATCTTTGACTTGGGAGGAGGCACCT 618700
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
||||||| || | || | || || | ||| || || || || || || || ||||| |
Sbjct 618699 TTGATGTTTCTATCCTGACCATCGAGGATGGCATCTTTGAGGTGAAAGCCACAGCTGGAG 618640
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAG 196018
| ||||| | ||||| ||||| || || || | ||| || ||||| || |||
Sbjct 618639 ACACTCACTTGGGTGGGGAAGACTTTGACAATCGCATGGTCCAACACTTTGT-GGAGGAG 618581
Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078
||| | ||| | |||||||| || || || ||||| | || || | |||
Sbjct 618580 TTCAAGAGGAAGCACAAGAAAGACATCACTCAGAACAAGAGGGCCGTCCGGAGGTTGAGG 618521
Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138
|| || || || | ||||| |||| || || || | |||| | | |||||||
Sbjct 618520 ACAGCCTGCGAGAGAGCCAAGAGAACCCTGTCCTCCAGCTCTCAGGCCAGCATTGAGATC 618461
Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198
|| || ||| ||| || | || ||||| || | || ||| | || || ||||| |||
Sbjct 618460 GACTCCCTGTATGAGGGTGTAGATTTCTACACCTCCATCACCAGAGCTCGCTTTGAGGAG 618401
Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255
| |||||||| | ||||| || | | | ||||| || || | | | | |||
Sbjct 618400 CTTAACTCTGAGCTTTTTAG--AG-GCACCCTTGAACCGGTGGAGAAGGCTTTGAGAGAC 618344
Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315
|| || ||||||||||| || || | || ||||| | || || || || || | ||
Sbjct 618343 GCCAAAATGGATAAGTCCCAGATTCACGATATTGTGTTGGTTGGTGGCTCCACAAGAATC 618284
Query 196316 CCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGAT 196374
|| ||||| || | | | | | || ||||| ||| | || | ||||| | ||
Sbjct 618283 CCCAAGATCCAGAAACTTC-TGCAAGAATTCTTTAATGGCAGGGACCTCAACAAGAGCAT 618225
Query 196375 CAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGT 196434
||| || || |||||||| ||||| || ||||| || ||||| || || ||||| | |
Sbjct 618224 CAATCCAGACGAAGCAGTGGCTTACGGCGCGGCAGTGCAGGCCGCCAT--TCTCATG-GG 618168
Query 196435 TGACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGG 196491
||||| | |||||||| || | || || || ||||| ||||| | || |||||
Sbjct 618167 TGACACGTCGGAAAACGTCCAGGACTTGCTCCTGCTGGATGTGGCACCGCTGTCACTGGG 618108
Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551
| |||| || || || || |||||||| | || | | || || || || || |
Sbjct 618107 TATTGAGACCGCCGGAGGAGTTATGACCGCCCTCATCAAGCGCAATACCACCATCCCCAA 618048
Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611
|| || || | || || || || ||||| || || ||||| || | || |||||
Sbjct 618047 CAAACAGACGCAGATTTTCTCCACTTACTCCGACAACCAGCCAGGAGTGCTGATCCAAGT 617988
Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671
|| ||||| || || || | || || ||| | || || || | || || | ||
Sbjct 617987 CTACGAAGGGGAGCGAGCCATGACCAAAGACAACAACCTCCTCGGCAAGTTTGAACTCAC 617928
Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731
|| ||||| ||||||| | ||||| || ||||| | || ||||||||| |||||
Sbjct 617927 AGGTATTCCCCCTGCACCACGGGGTGTACCTCAGATCGAGGTCACCTTCGATATCGACGC 617868
Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791
|| || || || ||||| | || |||||| | ||||| | |||||
Sbjct 617867 CAACGGCATCCTGAACGTTTCTGCCATAGACAAGAGCACCGGCAAGGAGAACAAGATCAC 617808
Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851
|| ||||| |||||||| || | || || || || || | ||||| ||||| ||
Sbjct 617807 CATCACCAACGACAAGGGTCGTTTAAGCAAAGAAGAGATCGAGAGAATGGTACAAGAGGC 617748
Query 196852 GGAAAAGTACAGGGAAGAAGACGAG 196876
||| |||||| | | || ||||||
Sbjct 617747 GGACAAGTACCGAGCCGAGGACGAG 617723
>seq10555
Length=3328687
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| || || ||||| || || |||||| | ||||| ||| |
Sbjct 3318643 ATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACCTTGGAGGTGGAGCCAAGC 3318584
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| ||||||||||||| ||||||||||| || || |||||||| |||
Sbjct 3318583 GACACCATCGAGAACGTCAAAGCCAAGATCCAAGATAAGGAGGGAATCCCACCCGACCAG 3318524
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || || |||||||| ||||| ||||| ||||| ||||| | || ||||||
Sbjct 3318523 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 3318464
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||| || || ||||| || || | || |||| |||
Sbjct 3318463 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTGAGGGGAGGT 3318416
Score = 185 bits (204), Expect = 1e-41
Identities = 179/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| |||||||| || ||||| ||||| || || |||||| | ||||| || |
Sbjct 3315667 GTATGCAGATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCTTGGAGGTGGAACCCA 3315608
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||| || || ||| ||||||||||||| ||||||||||| || || ||||| || |
Sbjct 3315607 GCGACACTATTGAGAACGTCAAAGCCAAGATCCAAGATAAGGAGGGAATCCCACCTGACC 3315548
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || || || ||||| ||||| |||||||||||||| ||||| ||| | || ||||
Sbjct 3315547 AGCAGCGTCTGATCTTTGCCGGTAAGCAGCTTGAAGATGGTCGTACTCTCTCCGACTACA 3315488
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| | || |||||| ||| || |||||||| || | || |||| |||
Sbjct 3315487 ACATCCAGAAGGAGAGTACCCTCCACCTTGTCCTCCGTCTGAGGGGAGGT 3315438
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| ||||| || || ||||| || || ||||| ||||| || ||| |
Sbjct 3315895 GTATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCAA 3315836
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||| || || ||| ||||||||||||| || ||||||||||||||||| ||||| |
Sbjct 3315835 GTGACACCATTGAGAACGTCAAAGCCAAGATCCAGGATAAGGAAGGCATTCCTCCCGACC 3315776
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || | || || |||||||| ||||| ||||||||||| ||||| | || ||||
Sbjct 3315775 AGCAGCGTTTGATCTTCGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACA 3315716
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| | || |||||||| || || || || || || | || |||| |||
Sbjct 3315715 ACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGTCTGAGGGGAGGT 3315666
Score = 156 bits (172), Expect = 6e-33
Identities = 163/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| ||||| || || ||||| || || ||||| ||||| || ||| |
Sbjct 3315439 GTATGCAGATCTTCGTGAAGACGCTGACTGGTAAGACCATCACTCTCGAAGTGGAGCCAA 3315380
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||| || || || | || || || || || |||||||| || || |||||||| |
Sbjct 3315379 GTGACACCATTGAAAATGTGAAGGCTAAAATCCAGGATAAGGAGGGAATCCCACCCGACC 3315320
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || || || ||||||||||| ||||| ||||||||||| ||||| | || ||||
Sbjct 3315319 AGCAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACA 3315260
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
|| | || |||||||| || || || || || ||
Sbjct 3315259 ACATCCAGAAGGAGTCCACCCTCCATCTCGTCCT 3315226
Score = 93.3 bits (102), Expect = 6e-14
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| ||||| || || ||||| || || ||||| ||||| || ||| |
Sbjct 3318417 GTATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCAA 3318358
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||| || || || | || || || || |||||||||||||||||||| || || |
Sbjct 3318357 GCGACACCATTGAAAATGTGAAGGCTAAAATCCAAGATAAGGAAGGCATTCCCCCTGACC 3318298
Query 171980 AGCA 171983
||||
Sbjct 3318297 AGCA 3318294
>seq183
Length=784777
Score = 170 bits (188), Expect = 3e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||||||||| ||||| ||||| || || |||||||| ||||||||| |
Sbjct 332312 ATGCAAATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCAAGT 332253
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|||||||| || || ||||||||||||| || || || ||||||||||| || || |||
Sbjct 332252 GACACAATTGAGAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 332193
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | | || || ||||| || ||||| ||||||||||| ||| | | || |||||
Sbjct 332192 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCTTGTCCGACTACAAT 332133
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || || ||||| ||||| || ||||| ||
Sbjct 332132 ATCCAGAAAGAGTCCACTCTCCATCTTGTCCT 332101
Score = 161 bits (178), Expect = 1e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| ||||| ||||| ||||| || || |||||||||||||||||| |
Sbjct 332084 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCAAGC 332025
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || ||| | || |||||||| || || || ||||||||||| || ||||||
Sbjct 332024 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 331965
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | | || ||||| || |||||||| |||||||| || ||||| | || ||||||
Sbjct 331964 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 331905
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || || || || || || || ||||| ||
Sbjct 331904 ATCCAGAAAGAATCCACCCTGCATCTTGTCCT 331873
Score = 159 bits (176), Expect = 5e-34
Identities = 165/216 (76%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| || || ||||| || || || || |||||||| ||||||||| |
Sbjct 331856 ATGCAGATCTTCGTAAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGCCAAGC 331797
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || ||||||||||||| ||||| || || |||||||| || ||||||
Sbjct 331796 GACACCATTGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGCATTCCCCCAGATCAG 331737
Query 171982 CA----ACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTA 172037
|| | | || ||||| || |||||||| |||||||| || ||||| |||| ||
Sbjct 331736 CAGAGGTTGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTA 331677
Query 172038 CAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
|||| | || |||||||| ||||| ||||| || ||
Sbjct 331676 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCT 331641
>seq592
Length=234143
Score = 152 bits (168), Expect = 7e-32
Identities = 356/532 (67%), Gaps = 4/532 (1%)
Strand=Plus/Plus
Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934
|||||||| || |||||||| || ||||| || || |||| | || || | ||||||
Sbjct 16012 ATCTTTGACCTGGGTGGTGGCACCTTTGACGTGTCCATTCTGACCATCGAGGATGGTATC 16071
Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994
|| || || ||| | || || ||||| || || || || ||||| || || || ||
Sbjct 16072 TTTGAGGTCAAGTCCACAGCCGGTGACACCCACCTTGGAGGTGAGGACTTTGACAACCGC 16131
Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054
| || || || ||||||| || || ||||| || || | || ||
Sbjct 16132 ATGGTCAACCACTTCATCACTGAGTTCAAGCGCAAATTCAAGAAGGACATCACAGGCAAC 16191
Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114
| || | ||||| || || || || || ||||| ||||| || || || || ||
Sbjct 16192 AAGCGTGCAGTACGTCGTCTCAGAACAGCTTGCGAACGGGCCAAGCGTACGCTGTCCTCC 16251
Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174
| | || | | | ||||| || || | | || || |||||||||| || |
Sbjct 16252 AGCACACAGGCCAGCATCGAGATCGACTCCCTCTACGAGGGGGTTGACTTCTACACCTCC 16311
Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234
|||||| | ||||| ||||| ||| | || ||||| ||||| | | | | || |||
Sbjct 16312 ATTACCAGGGCACGCTTTGAGGAGCTCAATTCTGACCTGTTTCGTGGGACTCTAGACCCT 16371
Query 196235 GTTGAACAAGTACTT-CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCT 196293
|| || ||| ||| ||||| || ||| |||| ||| || || | |||| ||||| ||
Sbjct 16372 GTGGAG-AAGGCCTTGCGTGATGCCAAGCTGGACAAGGCTCAGATCCATGATATTGTGCT 16430
Query 196294 TGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTT-CTTCAATA 196352
||| || || || || || ||||| ||||| || | | || | || || ||||||
Sbjct 16431 TGTTGGTGGCTCCACTCGCATTCCCAAGATCCAGAAACTCCTG-CAAGATTTCTTCAACG 16489
Query 196353 ATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404
| ||| | ||||| | || ||||| |||||||||||||||||||| ||
Sbjct 16490 GTCGTGATCTGAACAAGAGCATTAACCCTGATGAAGCAGTTGCTTATGGGGC 16541
Score = 89.7 bits (98), Expect = 7e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364
|| ||||| || || || || |||||||||||||| | | || ||| | || |||
Sbjct 8086 GGCATCGACTTGGGCACCACCTACTCATGTGTTGGCATTTTCCAGCATGGTAAAGTTGAG 8145
Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424
|| || | || ||||| || ||| | || || || || |||||||| ||||| |
Sbjct 8146 ATCATTGCCAACGACCAGGGCAACAGGACCACACCCAGCTATGTTGCCTTCACAGACACA 8205
Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484
|| | || |||||||||| || || |||||| || |||||||| | ||| |||||
Sbjct 8206 GAGAGACTGATTGGAGATGCTGCCAAGAATCAGGTGGCCATGAACCCCAACAACACTGTG 8265
Query 195485 TTTG 195488
||||
Sbjct 8266 TTTG 8269
>seq228
Length=588457
Score = 145 bits (160), Expect = 1e-29
Identities = 319/473 (67%), Gaps = 5/473 (1%)
Strand=Plus/Minus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|||||||| || || | || || || ||||| ||||| || || | || |||
Sbjct 47476 GCTATTGGCATTGACCTGGGCACGACCTACTCTTGTGTAGGAGTGTTCCAGCATGGAAAA 47417
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
|| ||||| || | || ||||| |||||| | || || || || || || || |||
Sbjct 47416 GTGGAGATCATTGCTAACGACCAGGGAAACAGAACCACCCCCAGCTATGTGGCTTTCACA 47357
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|| | || | || |||||||||| |||||||| || || |||||||| | |||
Sbjct 47356 GACACAGAGAGGCTGATTGGAGATGCTGCAAAAAACCAAGTGGCCATGAACCCCAACAAC 47297
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
||||| |||||||| ||| | || || || ||||||||| ||| || || |
Sbjct 47296 ACTGTGTTTGACGCCAAGAGGCTGATCGGCCGCAAGTTTGACGATCCTGTCGTTCAGTCC 47237
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598
||||| ||| ||||| | | |||| || || || | || ||||| | | || |
Sbjct 47236 GATATGAAGCACTGGCCCTCCCAAGTGGTCAGCGATGGAG--GA-AAGCCAAAGGTTCAA 47180
Query 195599 GTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657
||||| | || ||| |||| || ||| | || ||||| ||||| || ||||| |
Sbjct 47179 GTTGAGCACAAGGGAGAGCAGAAGACCTTTTAC-CCTGAAGATATTTCCTCCATGGTTCT 47121
Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717
| | |||||| | || | ||| || | | |||| | | |||| | |||| ||| |
Sbjct 47120 GGTGAAGATGTAAGAAATTGCAGAGGCCTATCTGGGACAGAAGGTGACAAATGCCGTTAT 47061
Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770
||||||||||| ||||||| || || || | ||||| || || || ||||
Sbjct 47060 TACTGTACCTGCCTACTTCAACGACTCTCAGAGGCAGGCCACCAAAGATGCTG 47008
>seq10722
Length=1616126
Score = 127 bits (140), Expect = 3e-24
Identities = 358/547 (65%), Gaps = 2/547 (0%)
Strand=Plus/Plus
Query 195859 AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAA 195918
||| | ||| || |||| || ||||| || || || |||||||||||||| | || |
Sbjct 765400 AGAAAGAAACGTGCTGATTTTCGATCTTGGCGGCGGCACGTTTGATGTCTCTATCCTGAC 765459
Query 195919 TATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGA 195978
||||||| ||| || ||||| || ||| | || ||||| || ||||| || || |||||
Sbjct 765460 CATTGAAGATGGCATCTTCGAGGTCAAGTCCACAGCTGGAGACACTCACCTGGGCGGTGA 765519
Query 195979 AGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGA 196037
|| ||||| || | || ||| || ||| |||||| || || | ||||
Sbjct 765520 GGACTTCGACAACCGCATGGTCAATCACTTCATCT-CCGAGTTCAAGCGCAAATACAAGA 765578
Query 196038 AAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCA 196097
|||| || || || ||||| | ||||| || |||| || || || | || |
Sbjct 765579 AAGACATCAGTGACAACAAGAGGGCGGTGCGTCGTCTGCGGACGGCCTGCGAGAGAGCGA 765638
Query 196098 AACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAA 196157
|||| || ||||| || | |||| | | | ||||| || ||| | | || ||
Sbjct 765639 AACGCACGCTCTCCTCCAGCACTCAGGCCAGCATCGAGATCGACTCGCTCTACGAGGGCG 765698
Query 196158 TTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA 196217
| |||||||| || | || ||| | || || || || ||| | ||| | || ||||
Sbjct 765699 TCGACTTCTACACCTCCATCACCAGGGCTCGCTTCGAGGAGCTGAACGCCGACCTGTTCC 765758
Query 196218 GGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGG 196277
| |||| ||||| || || || ||||| || || |||| ||||| ||
Sbjct 765759 GCGGCACGCTGGACCCTGTGGAGAAATCCCTCCGTGATGCTAAACTGGACAAGTCCCAGA 765818
Query 196278 TTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTT 196337
| | || || || || || ||||| ||||| || || || || || || || | ||
Sbjct 765819 TCCACGACATCGTGCTGGTTGGAGGGTCAACTCGCATCCCTAAAATCCAGAAGCTCCTGC 765878
Query 196338 CTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTT 196397
|||||||| ||||| | ||||| | || || || || || || ||||| |
Sbjct 765879 AGGATTTCTTCAACGGAAAAGAACTCAACAAGAGCATAAATCCAGACGAGGCTGTTGCGT 765938
Query 196398 ATGGTGC 196404
| |||||
Sbjct 765939 ACGGTGC 765945
Score = 116 bits (128), Expect = 5e-21
Identities = 113/143 (79%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767
||||||| || ||||||||||| ||||| | ||| || || || ||||| |||||||| |
Sbjct 764317 ATGCAGTGGTTACTGTACCTGCGTACTTTAATGACTCTCAGCGTCAGGCTACAAAGGATG 764376
Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826
| | | ||| | || ||||| ||| ||| |||| |||||||| |||||||| |||||
Sbjct 764377 CAGGGACCATTTCTGGACTAAA-TGTCCTTCGAATCATCAATGAGCCAACAGCAGCTGCC 764435
Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849
|| || || || |||||||||||
Sbjct 764436 ATAGCCTACGGCCTGGACAAGAA 764458
>seq10671
Length=1829250
Score = 96.9 bits (106), Expect = 5e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357
|||| | ||||| ||| | || || || ||||| |||||||| || | || |||
Sbjct 1497526 AGCTGTCGGTATTGATCTGGGGACCACATACTCCTGTGTTGGAGTCTTCCAGCATGGCAA 1497467
Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417
|| || ||||| | || |||||||||||| | || || ||| || || ||||| ||
Sbjct 1497466 AGTTGAAATTATTGCCAACGACCAAGGAAACAGGACCACGCCAAGCTATGTGGCCTTCAC 1497407
Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477
||||| ||| | || |||| ||||| || || || ||| ||||||||||||| |||
Sbjct 1497406 AGATACCGAAAGACTGATTGGTGATGCAGCCAAGAACCAGGTTGCTATGAACCCTACCAA 1497347
Query 195478 TACTGTCTTTG 195488
|| | ||||
Sbjct 1497346 CACAATTTTTG 1497336
Score = 95.1 bits (104), Expect = 2e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767
|||| || | || || ||||| ||||||| ||||| || || ||||| || ||||| |
Sbjct 1496769 ATGCTGTGATCACAGTGCCTGCCTACTTCAACGATTCCCAGCGTCAGGCTACTAAGGATG 1496710
Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827
||| | || | || || || ||| | || |||||||| ||||| || |||||||
Sbjct 1496709 CTGGAACCATCTCTGGCCTGAATGTTCTGCGTATCATCAATGAGCCAACTGCTGCTGCAA 1496650
Query 195828 TTGCTTATGGTCTGGACAAGAA 195849
||||||| ||||||||||| ||
Sbjct 1496649 TTGCTTACGGTCTGGACAAAAA 1496628
>seq10574
Length=3104428
Score = 96.9 bits (106), Expect = 5e-15
Identities = 129/179 (72%), Gaps = 3/179 (2%)
Strand=Plus/Plus
Query 195335 GTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACA 195394
|||||||| | | |||| ||||| ||||| || | || ||||| |||||||| |
Sbjct 749133 GTTGGTGTGTTTAAGAATGGACGTGTTGAGATCATTGCCAACGACCAGGGAAACCGCATC 749192
Query 195395 ACTCCATCGTACGTTGCCTTTACAGATAA---TGAACGTCTCGTTGGAGATGCCGCAAAA 195451
||||| || || || ||||||||| | | |||||||||| |||| ||||| || ||
Sbjct 749193 ACTCCTTCCTATGTGGCCTTTACAAGTGAGGGTGAACGTCTCATTGGTGATGCTGCCAAG 749252
Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCG 195510
|| ||| | |||||| || ||||||||||| || ||||| || || |||||
Sbjct 749253 AACCAGCTGACCTCCAACCCTGAGAACACTGTCTTTGATGCCAAGCGGCTGATCGGTCG 749311
Score = 93.3 bits (102), Expect = 6e-14
Identities = 126/175 (72%), Gaps = 3/175 (2%)
Strand=Plus/Plus
Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873
||| || || || |||||||| |||||||||||| ||||||| || || || | ||
Sbjct 749932 AACTGCTGCCGCCATTGCTTACGGTCTGGACAAG---AAGGACGGCGAGAAGAACATCTT 749988
Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933
| | || || |||||||| ||||| |||||||| || || || | ||||| ||| |
Sbjct 749989 GGTGTTCGACCTCGGTGGCGGTACCTTTGATGTGTCCCTGCTGACCATTGATAACGGTGT 750048
Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988
|| || || ||| ||| ||| || ||||| || || || || || ||||||
Sbjct 750049 GTTTGAGGTGGTGGCCACTAATGGAGACACTCACCTTGGAGGAGAGGACTTCGAT 750103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657774123089200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |