Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq71 89.7 2e-12
>seq71
Length=1164749
Score = 89.7 bits (98), Expect = 2e-12
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679
||||| |||||||| ||||| ||||| | | || ||||| || |||||||| | |||
Sbjct 1040157 GTTTTCACAGCTGTGTCAATGAGACCCTCTCTTCCTCCCATGGCGTGGAAGAAAAACTCA 1040098
Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739
||| || || | | | ||| |||| || || || | ||| || | |
Sbjct 1040097 GTAGGTGTGAGTCCGGCCAGGTAAGAGTTCTCCACAAACCCTCTGCTCTCAGGACCGTAG 1040038
Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799
||| ||| | ||||| || || |||| || || | ||||| | ||||||||||| ||
Sbjct 1040037 TCGTCTTTGATGAAGTGAGGAAGAGTCCGGTGCTTAAAGCCGAAAGGGATACGCTTACCC 1039978
Query 302800 TCAACGTTCTGCTGTCCCA 302818
|||||||||||||| ||||
Sbjct 1039977 TCAACGTTCTGCTGCCCCA 1039959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471615162987695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |