Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq10607 105 9e-18 seq10520 104 3e-17 seq5358 104 3e-17 seq10696 95.1 2e-14 seq10543 95.1 2e-14 seq10558 91.5 2e-13 seq516 89.7 7e-13 >seq10607 Length=2140885 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 1074656 TTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 1074597 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1074596 CCCCGACGGGGAG 1074584 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1068659 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1068600 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1068599 CCCGACGGGGAG 1068588 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1068659 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1068600 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1068599 CCCGACGGGGAG 1068588 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1074655 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1074596 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1074595 CCCGACGGGGAG 1074584 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 1074582 AACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 1074641 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 1074642 TATACTAACGAGGA 1074655 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 1068587 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 1068646 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 1068647 ATACTAACGAGGA 1068659 >seq10520 Length=3642855 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1864670 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1864611 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1864610 CCCGACGGGGAG 1864599 Score = 102 bits (112), Expect = 1e-16 Identities = 70/78 (90%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 11724 ACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 || || |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||| Sbjct 1864676 ACTCACTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 1864617 Query 11783 CGATTCCCCGACGAGGAG 11800 ||||||||||||| |||| Sbjct 1864616 CGATTCCCCGACGGGGAG 1864599 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1860008 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1859949 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1859948 CCCGACGGGGAG 1859937 Score = 96.9 bits (106), Expect = 5e-15 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 11724 ACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 || || ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||| Sbjct 1860014 ACTCACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 1859955 Query 11783 CGATTCCCCGACGAGGAG 11800 | ||||||||||| |||| Sbjct 1859954 CAATTCCCCGACGGGGAG 1859937 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1864599 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1864658 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1864659 TACTAACGAGGA 1864670 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1859937 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1859996 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1859997 TACTAACGAGGA 1860008 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| ||| ||||| | |||||||| ||||||| |||| Sbjct 1859061 TCCTCGTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACTGGGGTTCAATTC 1859002 Query 8718 CCCGACGAGGAG 8729 |||||| |||| Sbjct 1859001 CCCGACAGGGAG 1858990 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||| || ||||| |||| ||||| | |||||||||||| ||| |||| Sbjct 1862020 TCCTCGTTAGTATAGTAGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGATTCAATTC 1861961 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1861960 CCCGACG-GGAG 1861950 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 11724 ACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 || || |||||||||||||||| || ||||| |||| ||||| | |||||||||||| || Sbjct 1862026 ACTCACTCCTCGTTAGTATAGTAGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGATT 1861967 Query 11783 CGATTCCCCGACGAGGAG 11800 | ||||||||||| |||| Sbjct 1861966 CAATTCCCCGACG-GGAG 1861950 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || ||||||||||||||||||| ||||| ||| ||||| | |||||||| ||||||| | Sbjct 1859064 CACTCCTCGTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACTGGGGTTCAA 1859005 Query 11786 TTCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 1859004 TTCCCCGACAGGGAG 1858990 >seq5358 Length=4687 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2273 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2332 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2333 CCCGACGGGGAG 2344 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2273 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2332 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2333 CCCGACGGGGAG 2344 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2344 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2285 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 2284 TACTAACGAGGAGTT 2270 >seq10696 Length=1481488 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 848920 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 848979 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 848980 CCCGACGAGGAG 848991 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||| Sbjct 845832 TAATCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGA 845773 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 845772 TTCCCCGACGGGGAG 845758 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 848920 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 848979 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 848980 CCCGACGAGGAG 848991 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 815421 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 815362 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 815361 CCCGACGGGGAG 815350 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 816205 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 816146 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 816145 CCCGACGGGGAG 816134 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||| |||||||| ||||| ||| ||||| ||||| ||||||||||||||||| Sbjct 817267 TCCTCGTTAATATAGTGGACAGTATCTCCGCCTGTCACACGGAAGACCGGGGTTCGATTC 817326 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 817327 CCCGACGGGGAG 817338 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 819193 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 819252 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 819253 CCCGACGGGGAG 819264 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 849557 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 849616 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 849617 CCCGACGGGGAG 849628 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||| |||||||| ||||| ||| ||||| ||||| ||||||||||||||||| Sbjct 817267 TCCTCGTTAATATAGTGGACAGTATCTCCGCCTGTCACACGGAAGACCGGGGTTCGATTC 817326 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 817327 CCCGACGGGGAGG 817339 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 848991 CTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 848932 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 848931 TACTAACGAGGAT 848919 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 849557 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 849616 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 849617 CCCGACGGGGAGG 849629 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 815421 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 815362 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 815361 CCCGACGGGGAG 815350 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 816205 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 816146 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 816145 CCCGACGGGGAG 816134 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 819193 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 819252 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 819253 CCCGACGGGGAG 819264 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 845829 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 845770 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 845769 CCCGACGGGGAG 845758 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 845758 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 845817 Query 139413 TACTAACGAGGATT 139426 |||||||||||||| Sbjct 845818 TACTAACGAGGATT 845831 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 815350 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 815409 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 815410 TACTAACGAGGAT 815422 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 816134 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 816193 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 816194 TACTAACGAGGAT 816206 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||||| |||| ||| |||| | |||||| Sbjct 817338 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGTGTGACAGGCGGAGATACTGTCCACTA 817279 Query 139413 TACTAACGAGGAT 139425 || |||||||||| Sbjct 817278 TATTAACGAGGAT 817266 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 849628 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 849569 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 849568 TACTAACGAGGAT 849556 >seq10543 Length=3469552 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1617139 TCCTCGTTAGTATAGTGGATAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1617080 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1617079 CCCGACGGGGAG 1617068 Score = 93.3 bits (102), Expect = 6e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 11724 ACCCAGTCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 || || |||||||||||||||||| |||||| ||| ||||| | ||| ||||||||||| Sbjct 1617145 ACTCACTCCTCGTTAGTATAGTGGATAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTT 1617086 Query 11783 CGATTCCCCGACGAGGAG 11800 ||||||||||||| |||| Sbjct 1617085 CGATTCCCCGACGGGGAG 1617068 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1617630 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1617571 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1617570 CCCGACGGGGAG 1617559 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1618099 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1618040 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1618039 CCCGACGGGGAG 1618028 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||| Sbjct 1617633 CACTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGA 1617574 Query 11786 TTCCCCGACGAGGAG 11800 |||||||||| |||| Sbjct 1617573 TTCCCCGACGGGGAG 1617559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||| Sbjct 1618102 CACTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGA 1618043 Query 11786 TTCCCCGACGAGGAG 11800 |||||||||| |||| Sbjct 1618042 TTCCCCGACGGGGAG 1618028 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| || |||||| Sbjct 1617068 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTATCCACTA 1617127 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1617128 TACTAACGAGGA 1617139 >seq10558 Length=2852526 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||| Sbjct 2035500 TACTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGA 2035441 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 2035440 TTCCCCGACGGGGAG 2035426 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2035497 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2035438 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2035437 CCCGACGGGGAG 2035426 >seq516 Length=255305 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 25492 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 25551 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 25552 CCCGACGGGGAG 25563 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 28966 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 29025 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 29026 CCCGACGGGGAG 29037 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 25492 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 25551 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 25552 CCCGACGGGGAG 25563 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 28966 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 29025 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 29026 CCCGACGGGGAG 29037 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 25563 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 25504 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 25503 TACTAACGAGGAT 25491 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 29037 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 28978 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 28977 TACTAACGAGGAT 28965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652757196388400